Factsheet for GSMUA_AchrUn_randomP11740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P04700_001
GSMUA_Achr1P14070_001
GSMUA_Achr1P27230_001
GSMUA_Achr2P01120_001
GSMUA_Achr2P12680_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr3P25390_001
GSMUA_Achr4P22570_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P09010_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr6P24410_001
GSMUA_Achr6P33560_001
GSMUA_Achr7P01390_001
GSMUA_Achr8P02250_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40540.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592
AT5G40540.1	GSMUA_Achr1P04700_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr1P14070_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr1P27230_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr2P12680_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr3P25390_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr4P22570_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr5P09010_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr6P24410_001	AT4G14640.1	17360592
AT5G40540.1	GSMUA_Achr7P01390_001	AT4G14640.1	17360592
AT5G50180.1	GSMUA_Achr10P...	AT3G54120.1	21798944
AT5G50180.1	GSMUA_Achr6P33560_001	AT3G54120.1	21798944
AT5G50180.1	GSMUA_Achr8P02250_001	AT3G54120.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P06670_001	Banana	cytosol	87.82	38.92
GSMUA_Achr9P01860_001	Banana	cytosol	87.18	38.75
KRG93193	Soybean	cytosol	69.87	35.05
TraesCS6D01G192100.1	Wheat	cytosol	76.92	34.29
TraesCS6A01G208500.1	Wheat	cytosol	76.92	34.29
HORVU6Hr1G053310.1	Barley	cytosol	76.92	34.09
Os02t0594100-01	Rice	cytosol	76.92	34.09
TraesCS6B01G237600.2	Wheat	cytosol	76.92	33.9
VIT_14s0066g00370.t01	Wine grape	cytosol	76.28	33.81
KRH54319	Soybean	cytosol	76.28	33.81
Zm00001d050947_P007	Maize	cytosol	76.28	33.71
EES05353	Sorghum	cytosol	75.64	33.52
KRH63627	Soybean	cytosol	75.64	33.52
PGSC0003DMT400032824	Potato	cytosol	75.64	33.43
VIT_17s0000g09290.t01	Wine grape	cytosol	75.0	33.24
Solyc02g093410.2.1	Tomato	cytosol	75.0	33.14
KRG94025	Soybean	cytosol	73.72	33.05
KRH56528	Soybean	cytosol	72.44	32.66
KRH07131	Soybean	cytosol	72.44	32.38
KXG27334	Sorghum	cytosol	71.15	32.36
AT5G50180.1	Thale cress	cytosol	70.51	31.79
CDY36362	Canola	cytosol	70.51	31.52
Bra025563.1-P	Field mustard	cytosol	70.51	31.52
AT3G27560.1	Thale cress	cytosol	71.79	31.46
AT5G40540.1	Thale cress	cytosol	71.15	31.44
Bra000612.1-P	Field mustard	cytosol	70.51	31.34
CDY34048	Canola	cytosol	70.51	31.34
CDY64638	Canola	cytosol	70.51	31.34
CDY42570	Canola	cytosol	69.87	31.23
Bra025286.1-P	Field mustard	cytosol	70.51	30.9
CDY13723	Canola	cytosol	70.51	30.9
CDX83708	Canola	cytosol	69.87	29.95
GSMUA_Achr10P...	Banana	cytosol	55.77	22.77
GSMUA_Achr4P18600_001	Banana	cytosol	54.49	22.49
GSMUA_Achr1P26270_001	Banana	cytosol	30.13	20.7
GSMUA_Achr8P18690_001	Banana	cytosol	39.1	17.33
GSMUA_AchrUn_...	Banana	cytosol	37.82	17.25
GSMUA_Achr1P09680_001	Banana	cytosol	37.82	17.25
GSMUA_Achr2P22880_001	Banana	cytosol	39.1	17.13
GSMUA_Achr1P23740_001	Banana	cytosol	33.33	14.44
GSMUA_Achr10P...	Banana	cytosol	37.18	14.11
GSMUA_Achr7P15770_001	Banana	cytosol	37.18	13.91
GSMUA_Achr6P03680_001	Banana	cytosol	37.18	13.88
GSMUA_Achr7P04900_001	Banana	cytosol	35.9	13.46
GSMUA_Achr9P05820_001	Banana	cytosol	40.38	12.75
GSMUA_Achr4P20740_001	Banana	cytosol	29.49	12.04
GSMUA_Achr10P...	Banana	cytosol	41.67	11.59
GSMUA_Achr8P34140_001	Banana	extracellular, plasma membrane	20.51	11.55
GSMUA_Achr7P03940_001	Banana	cytosol	32.69	11.44
GSMUA_Achr2P15610_001	Banana	cytosol	42.31	11.24
GSMUA_Achr9P08830_001	Banana	cytosol	37.82	11.22
GSMUA_Achr6P25310_001	Banana	cytosol	37.18	11.11
GSMUA_Achr4P30980_001	Banana	cytosol	40.38	10.92
GSMUA_Achr1P14940_001	Banana	cytosol	31.41	10.77
GSMUA_Achr7P03190_001	Banana	cytosol	33.97	9.01
GSMUA_Achr4P04890_001	Banana	cytosol	32.05	8.99
GSMUA_Achr6P26170_001	Banana	cytosol	37.82	7.91
GSMUA_AchrUn_...	Banana	cytosol	5.77	4.23
GSMUA_Achr8P34130_001	Banana	cytosol	3.85	2.36
GSMUA_Achr1P26280_001	Banana	cytosol	3.21	2.11

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG11740_001
EnsemblPlants:GSMUA_AchrUn_randomP11740_001	EnsemblPlants:GSMUA_AchrUn_randomT11740_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0U8D3	PFAM:PF07714
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR44258	PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000295BD58	:	:

Description

Putative Serine/threonine-protein kinase HT1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11740_001]

Coordinates

chrchrUn_random:+:56540856..56541526

Molecular Weight (calculated)

17528.6 Da

IEP (calculated)

8.635

GRAVY (calculated)

-0.212

Length

156 amino acids

Sequence
(BLAST)

001: MESGTGFFAL EECRLDPKWL IDPELLFVGP KIGEGAHAEV YEGKYKNQNV AVKVMHKGDS QEDVAKREAR YMREVAMLAR GQHKNLVKFI GACKEPMVVV
101: TELLLGGSLR KYLINMRPRN LEPRVAVGFA LDIARAMECL HSHGIIHRDL KPGNCL

Best Arabidopsis Sequence Match ( AT5G40540.4 )
(BLAST)

001: MGSVTGFYSN EVFELDPKWV VDPQHLFVGP KIGEGAHAKI YEGKYKNKTV AIKIVKRGES PEEIAKRESR FAREVSMLSR VQHKNLVKFI GACKEPIMVI
101: VTELLLGGTL RKYLVSLRPG SLDIRVAVGY ALDIARAMEC LHSHGVIHRD LKPESLILTA DYKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRHGEKKHY NHKVDAYSFA IVLWELIHNK LPFEGMSNLQ AAYAAAFKVS FLIFKCFNHL VLQPDNVFLI VVCFIIFRVR T

Arabidopsis Description

Protein kinase ATN1 [Source:UniProtKB/TrEMBL;Acc:Q9FM43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.