CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES03891
EES09201
EES16322
KXG37587
KXG37588
OQU78227
OQU78555

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40540.1	EES01631	AT2G41100.1	17360592
AT5G40540.1	EES09201	AT2G41100.1	17360592
AT5G40540.1	EES16322	AT2G41100.1	17360592
AT5G40540.1	OQU78227	AT2G41100.1	17360592
AT5G40540.1	KXG37587	AT4G14640.1	17360592
AT5G40540.1	KXG37588	AT4G14640.1	17360592
AT5G50180.1	EES03891	AT3G54120.1	21798944
AT5G50180.1	OQU78555	AT3G54120.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050947_P007	Maize	cytosol	96.5	93.77
EES05353	Sorghum	cytosol	94.46	92.05
Os02t0594100-01	Rice	cytosol	94.17	91.76
TraesCS6A01G208500.1	Wheat	cytosol	92.13	90.29
TraesCS6D01G192100.1	Wheat	cytosol	91.84	90.0
HORVU6Hr1G053310.1	Barley	cytosol	92.13	89.77
TraesCS6B01G237600.2	Wheat	cytosol	92.13	89.27
GSMUA_AchrUn_...	Banana	cytosol	51.02	82.16
GSMUA_Achr6P06670_001	Banana	cytosol	83.38	81.25
VIT_17s0000g09290.t01	Wine grape	cytosol	82.51	80.4
GSMUA_Achr9P01860_001	Banana	cytosol	81.92	80.06
VIT_14s0066g00370.t01	Wine grape	cytosol	80.76	78.69
KRH54319	Soybean	cytosol	80.47	78.41
Solyc02g093410.2.1	Tomato	cytosol	80.17	77.9
PGSC0003DMT400032824	Potato	cytosol	80.17	77.9
KRH63627	Soybean	cytosol	78.72	76.7
AT5G50180.1	Thale cress	cytosol	77.26	76.59
KRG93193	Soybean	cytosol	68.8	75.88
CDY64638	Canola	cytosol	76.97	75.21
Bra000612.1-P	Field mustard	cytosol	76.97	75.21
CDY34048	Canola	cytosol	76.97	75.21
KRH07131	Soybean	cytosol	75.8	74.5
KRG94025	Soybean	cytosol	75.51	74.43
CDY42570	Canola	cytosol	74.93	73.64
CDY36362	Canola	cytosol	74.93	73.64
KRH56528	Soybean	cytosol	74.05	73.41
Bra025563.1-P	Field mustard	cytosol	74.64	73.35
AT5G40540.1	Thale cress	cytosol	74.93	72.8
GSMUA_AchrUn_...	Banana	cytosol	32.36	71.15
CDY13723	Canola	cytosol	73.76	71.07
Bra025286.1-P	Field mustard	cytosol	73.18	70.51
AT3G27560.1	Thale cress	cytosol	72.89	70.22
CDX83708	Canola	cytosol	71.43	67.31
KXG37273	Sorghum	cytosol, plastid	58.31	48.54
EES00452	Sorghum	cytosol	33.82	31.44
EES13540	Sorghum	cytosol	37.03	30.46
EES12824	Sorghum	cytosol	36.44	30.19
EES06353	Sorghum	cytosol	37.03	30.09
EER90083	Sorghum	cytosol, mitochondrion	35.57	30.05
OQU87530	Sorghum	cytosol	31.49	28.5
KXG24726	Sorghum	vacuole	36.44	23.67
EER99373	Sorghum	cytosol, plastid	32.94	21.24
EES06176	Sorghum	cytosol	34.99	20.87
KXG24164	Sorghum	cytosol	32.94	20.62
EES16697	Sorghum	cytosol	31.49	20.3
KXG22364	Sorghum	cytosol	35.28	19.9
KXG27800	Sorghum	cytosol	30.9	19.7
EER97120	Sorghum	cytosol	33.82	19.53
EES13144	Sorghum	cytosol	31.78	19.26
KXG31606	Sorghum	cytosol	31.78	19.06
OQU80422	Sorghum	cytosol	33.24	18.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	UniProt:A0A1B6PNU8	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	ProteinID:KXG27333.1	EnsemblPlants:KXG27334	ProteinID:KXG27334	ProteinID:KXG27334.1
ProteinID:KXG27335.1	ProteinID:KXG27336.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44258	PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3006G252700	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001C804F4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:59058822..59067193

Molecular Weight (calculated)

38687.9 Da

IEP (calculated)

7.143

GRAVY (calculated)

-0.250

Length

343 amino acids

Sequence
(BLAST)

001: MEGLSIDPKW LIDPKLLFVG PRIGEGAHAK VYEGKYKNQS VAIKIVHKGD TPEEMTKREG RFLREVTMLS SVQHKNLVKF IGACLEPVMV VVTELLVGGS
101: LRKYLVSLRP RSLETHVAVG FALDIARAME CLHAHGIIHR DLKPENLLLT ADQRTVKLVD LGLAREETLT EMMTAETGTY RWMAPELYST VTLRQGEKKH
201: YNHKVDVYSF AIVLWELLHN KLPFEGMSNL QAAYAAAFKN IRPSADNLPE ELSEILTSCW KEDPNNRPNF TQIVQMLLHY LSTLSPQETL APHRTFSSEN
301: TILPPESPGT SSLMASRGDL GETPKGKMED KPRGFFFCFS ECY

Best Arabidopsis Sequence Match ( AT5G50180.1 )
(BLAST)

001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY

Arabidopsis Description

At5g50180 [Source:UniProtKB/TrEMBL;Acc:Q9FGS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.