CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER95951
EES11990
KXG30263
KXG37365
KXG38192

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	EES11990	AT3G11590.1	21798944
AT5G58950.1	KXG30263	AT3G11590.1	21798944
AT5G58950.1	EER95951	AT3G22960.1	21798944
AT5G58950.1	KXG37365	AT3G22960.1	21798944
AT5G58950.1	KXG38192	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80422	Sorghum	cytosol	83.91	51.04
KRH13893	Soybean	cytosol	40.63	46.95
KRH13899	Soybean	cytosol	40.63	46.95
Os01t0747400-01	Rice	cytosol	75.46	44.9
KRH43461	Soybean	cytosol	38.26	44.21
TraesCS3D01G273200.1	Wheat	cytosol	69.13	43.59
TraesCS3A01G274000.1	Wheat	cytosol	68.6	43.26
HORVU3Hr1G071240.2	Barley	cytosol	68.34	43.02
KRH27396	Soybean	cytosol	30.61	42.8
TraesCS3B01G307700.2	Wheat	cytosol	67.81	42.76
GSMUA_Achr9P05820_001	Banana	cytosol	54.35	41.7
KRH10889	Soybean	cytosol	49.87	40.91
KRH21427	Soybean	cytosol	49.08	40.17
PGSC0003DMT400033356	Potato	cytosol, plastid	50.66	39.67
Solyc03g006400.2.1	Tomato	cytosol	50.13	39.58
CDX80321	Canola	cytosol	49.6	39.58
EES00452	Sorghum	cytosol	38.26	39.3
KRH50054	Soybean	cytosol, plastid	50.66	38.55
CDX71145	Canola	cytosol, plastid	48.02	38.4
PGSC0003DMT400076363	Potato	cytosol	50.66	38.1
Solyc02g078140.2.1	Tomato	cytosol	50.66	38.1
CDX88676	Canola	cytosol, plastid	48.02	38.08
CDY69707	Canola	cytosol, plastid	49.6	38.06
CDY32673	Canola	cytosol	48.02	37.92
KRH20446	Soybean	cytosol, plastid	49.34	37.85
Bra002606.1-P	Field mustard	cytosol, plastid	49.34	37.85
GSMUA_Achr10P...	Banana	cytosol	55.41	37.43
KXG22364	Sorghum	cytosol	59.89	37.34
CDX99086	Canola	cytosol, plastid	43.54	37.08
GSMUA_Achr4P30980_001	Banana	cytosol	55.67	36.57
CDY02848	Canola	cytosol	46.17	36.38
CDY32674	Canola	cytosol, plastid	46.44	36.07
Bra006738.1-P	Field mustard	cytosol, plastid	47.76	35.98
GSMUA_Achr2P15610_001	Banana	cytosol	55.41	35.78
CDX86103	Canola	cytosol	43.8	35.62
Bra020343.1-P	Field mustard	cytosol, plastid	46.44	34.38
AT5G58950.1	Thale cress	plastid	47.49	34.29
Bra018183.1-P	Field mustard	cytosol	43.8	34.02
EER90083	Sorghum	cytosol, mitochondrion	35.09	32.76
KXG31606	Sorghum	cytosol	48.55	32.17
AT3G46930.2	Thale cress	cytosol	43.01	31.65
KXG27334	Sorghum	cytosol	28.5	31.49
EES05353	Sorghum	cytosol	27.97	30.11
EES13540	Sorghum	cytosol	30.87	28.06
EES06353	Sorghum	cytosol	30.61	27.49
EES12824	Sorghum	cytosol	29.29	26.81
GSMUA_Achr6P26170_001	Banana	cytosol	52.77	26.81
KXG37273	Sorghum	cytosol, plastid	27.7	25.49
KXG24726	Sorghum	vacuole	31.13	22.35
KXG24164	Sorghum	cytosol	28.5	19.71
EES16697	Sorghum	cytosol	27.18	19.36
EER99373	Sorghum	cytosol, plastid	26.65	18.98
EES06176	Sorghum	cytosol	28.5	18.78
KXG27800	Sorghum	cytosol	26.65	18.77
EES13144	Sorghum	cytosol	27.18	18.2
EER97120	Sorghum	cytosol	27.44	17.51

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	EntrezGene:8062182	UniProt:A0A1W0VZG7	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU87530	ProteinID:OQU87530	ProteinID:OQU87530.1
PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581
PANTHER:PTHR44581:SF1	InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G294000	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A84D76	RefSeq:XP_002458479.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:62648864..62650582

Molecular Weight (calculated)

42688.4 Da

IEP (calculated)

8.851

GRAVY (calculated)

-0.325

Length

379 amino acids

Sequence
(BLAST)

001: MGRTRAGVRL GADRPEDWRG PPAPVRAPPG KLKHRKKGGH ANGSVKEVLE KWSIDRSQLL IGHRFASGAH SRLFHGIYKD QPVAVKFTRQ PDNQEDAELA
101: AQLEKQFSTE VTTLARLNHP NVIKLVGAWS SRPAFCVITE FLSGGSLGAF LHKLDHKALP LDKIISISLD IARGMAYIHS QGVVHRDVKP DNIIFDEEFS
201: AKIVDFGIAC EEEYCDPLAN DTGTFRWMAP EMMKHKAYGR KVDVYSFGLI LWEMFSGTVP YEELNPFQAA LAVFDKNVRP PIPTSCPAPV RLLIEQCWAS
301: HPEKRPDFCQ IVQILEKFKT VLDRDGTLDN MPSSICQETH GHKNWLAHWV QKLKHSHIMS SVVTRHHSVS SPFQTVLIR

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.