Factsheet for TraesCS3A01G274000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS2A01G240200.1
TraesCS2A01G282200.1
TraesCS2B01G257800.1
TraesCS2B01G299400.1
TraesCS2D01G237900.1
TraesCS2D01G281000.1
TraesCS7A01G134600.1
TraesCS7B01G035800.1
TraesCS7D01G134000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	TraesCS2A01G282200.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2B01G299400.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2D01G281000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7A01G134600.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7B01G035800.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7D01G134000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2A01G240200.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2B01G257800.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2D01G237900.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G273200.1	Wheat	cytosol	96.01	96.01
TraesCS3B01G307700.2	Wheat	cytosol	95.34	95.34
HORVU3Hr1G071240.2	Barley	cytosol	86.69	86.54
Zm00001d032310_P001	Maize	cytosol	69.05	69.4
OQU87530	Sorghum	cytosol	43.26	68.6
OQU80422	Sorghum	cytosol	68.22	65.81
Os01t0747400-01	Rice	cytosol	69.22	65.31
TraesCS1A01G339600.1	Wheat	cytosol	52.58	52.67
KRH10889	Soybean	cytosol	39.43	51.3
KRH21427	Soybean	cytosol	39.43	51.19
PGSC0003DMT400033356	Potato	cytosol, plastid	40.77	50.62
GSMUA_Achr9P05820_001	Banana	cytosol	41.6	50.61
Solyc03g006400.2.1	Tomato	cytosol	40.27	50.42
CDX80321	Canola	cytosol	39.77	50.32
KRH50054	Soybean	cytosol, plastid	41.26	49.8
KRH20446	Soybean	cytosol, plastid	40.43	49.19
CDX88676	Canola	cytosol, plastid	38.94	48.95
PGSC0003DMT400076363	Potato	cytosol	40.93	48.81
Bra002606.1-P	Field mustard	cytosol, plastid	40.1	48.79
CDY69707	Canola	cytosol, plastid	40.1	48.79
CDX71145	Canola	cytosol, plastid	38.44	48.73
Solyc02g078140.2.1	Tomato	cytosol	40.77	48.61
CDY32673	Canola	cytosol	38.77	48.54
GSMUA_Achr10P...	Banana	cytosol	44.26	47.42
CDY02848	Canola	cytosol	37.94	47.4
CDY32674	Canola	cytosol, plastid	38.44	47.34
Bra006738.1-P	Field mustard	cytosol, plastid	39.43	47.12
Bra020343.1-P	Field mustard	cytosol, plastid	39.77	46.68
KRH43461	Soybean	cytosol	25.29	46.34
AT5G58950.1	Thale cress	plastid	40.43	46.29
KRH13899	Soybean	cytosol	25.12	46.04
KRH13893	Soybean	cytosol	25.12	46.04
KRH27396	Soybean	cytosol	20.63	45.76
CDX99086	Canola	cytosol, plastid	33.61	45.39
CDX86103	Canola	cytosol	34.78	44.85
GSMUA_Achr4P30980_001	Banana	cytosol	42.76	44.54
GSMUA_Achr2P15610_001	Banana	cytosol	42.93	43.95
Bra018183.1-P	Field mustard	cytosol	34.94	43.03
AT3G46930.2	Thale cress	cytosol	35.94	41.94
TraesCS3A01G313600.1	Wheat	cytosol	37.27	40.0
TraesCS6A01G172600.1	Wheat	cytosol	22.3	39.3
TraesCS3A01G001500.1	Wheat	cytosol	23.46	38.63
TraesCS7A01G388800.1	Wheat	mitochondrion	23.46	35.61
TraesCS6A01G155200.2	Wheat	cytosol	22.96	33.01
TraesCS7A01G292800.1	Wheat	cytosol	22.46	32.45
GSMUA_Achr6P26170_001	Banana	cytosol	40.1	32.31
TraesCS6A01G208500.1	Wheat	cytosol	18.8	32.29
TraesCS7A01G488200.1	Wheat	cytosol	22.46	31.62
TraesCS5A01G469200.1	Wheat	cytosol	18.64	27.05
TraesCS2A01G577300.1	Wheat	cytosol	20.3	23.87
TraesCS5A01G124800.3	Wheat	cytosol	20.3	23.15
TraesCS6A01G071900.1	Wheat	cytosol	22.13	23.01
TraesCS7A01G326700.1	Wheat	cytosol	19.8	22.2
TraesCS2A01G577200.1	Wheat	cytosol	19.8	22.16
TraesCS5A01G338800.1	Wheat	cytosol	22.13	22.13
TraesCS2A01G577000.1	Wheat	cytosol	19.8	21.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581
PANTHER:PTHR44581:SF1	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3A01G274000	EnsemblPlants:TraesCS3A01G274000.1	TIGR:cd13999	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:+:502836457..502838876

Molecular Weight (calculated)

67357.3 Da

IEP (calculated)

9.727

GRAVY (calculated)

-0.593

Length

601 amino acids

Sequence
(BLAST)

001: MDDEDYSWVR RTRFSHSVVR SNSGREQFGA FVEQFNRGAA LRQNKGSDSG FKLHGMNFEP RTKASATTNA APISRTRSLS AQPKTDLNHA FSNAMPVHHH
101: EKPADHGRPP QSAPANNSAN GTRGRNNLFV DVCSEPEVQE PGKGDSPGPL EFSFHPEEQS MRLQRVCSSP SPFPAKKTPV LDAPRPPVRS SSLRVLPEGR
201: STQMLRARSP LPNRPVPEVF KEAKSASKRF STPPPPRRKS SSPPRAPPAD APLKAPAKVK HHRKEHWDNE RAKAAATKVL DSWTVDRKQL LIGQKFAYGA
301: HSRLFHGIYK EVPVAVKFIR QPDVDEDAEL ASQLEKQFNT EVVTLSRLQH RNVIKLVGAC TSPPVFCVIT EFLSGGSLRS FLHKQEHKSL PLDKIISVGL
401: DIAHGMGYVH SQGIVHRDVK PENIIFDGDC AKIVDFGIAC EEAYCDPLAN DPGTFRWMAP EMMKHKPYGR KVDVYSFGLI LWEMLTGSVP YEDLTPFQAA
501: FAVFDKNVRP AIPATCPAAL RVLIEQCWAL QADKRPEFWQ IVQLLDKFKM VLERDGTLDN MPSSNCQENH DPKKWLAHWL HKLKHPHHHH DLSGPPPPKL
601: L

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.