Factsheet for Solyc03g006400.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g110190.2.1
Solyc09g082970.2.1
Solyc10g054080.1.1
Solyc10g083190.1.1
Solyc11g044880.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	Solyc10g083190.1.1	AT3G11590.1	21798944
AT5G58950.1	Solyc09g082970.2.1	AT3G22960.1	21798944
AT5G58950.1	Solyc01g110190.2.1	AT4G39050.1	21798944
AT5G58950.1	Solyc10g054080.1.1	AT4G39050.1	21798944
AT5G58950.1	Solyc11g044880.1.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033356	Potato	cytosol, plastid	95.83	95.04
Solyc02g078140.2.1	Tomato	cytosol	75.62	72.02
KRH10889	Soybean	cytosol	66.25	68.83
KRH21427	Soybean	cytosol	65.42	67.82
KRH50054	Soybean	cytosol, plastid	68.33	65.86
KRH20446	Soybean	cytosol, plastid	67.71	65.79
CDX71145	Canola	cytosol, plastid	58.75	59.49
CDX88676	Canola	cytosol, plastid	59.17	59.41
CDY32673	Canola	cytosol	58.12	58.12
CDX80321	Canola	cytosol	57.5	58.11
Bra006738.1-P	Field mustard	cytosol, plastid	59.58	56.86
CDY32674	Canola	cytosol, plastid	57.71	56.76
CDY02848	Canola	cytosol	56.88	56.76
KRH13899	Soybean	cytosol	38.75	56.71
KRH13893	Soybean	cytosol	38.75	56.71
CDY69707	Canola	cytosol, plastid	58.33	56.68
Bra002606.1-P	Field mustard	cytosol, plastid	58.33	56.68
KRH43461	Soybean	cytosol	38.33	56.1
KRH27396	Soybean	cytosol	31.46	55.72
Bra020343.1-P	Field mustard	cytosol, plastid	58.33	54.69
AT5G58950.1	Thale cress	plastid	59.79	54.67
GSMUA_Achr9P05820_001	Banana	cytosol	56.25	54.66
CDX99086	Canola	cytosol, plastid	48.12	51.91
CDX86103	Canola	cytosol	48.96	50.43
OQU87530	Sorghum	cytosol	39.58	50.13
GSMUA_Achr10P...	Banana	cytosol	57.71	49.38
Bra018183.1-P	Field mustard	cytosol	49.79	48.98
GSMUA_Achr2P15610_001	Banana	cytosol	59.38	48.55
GSMUA_Achr4P30980_001	Banana	cytosol	57.71	48.01
AT3G46930.2	Thale cress	cytosol	50.42	46.99
Solyc03g114310.2.1	Tomato	cytosol	33.12	45.3
Os01t0201200-01	Rice	nucleus	51.25	43.69
TraesCS3B01G158300.1	Wheat	nucleus	48.75	41.79
Solyc12g016060.1.1	Tomato	cytosol	16.67	41.67
TraesCS3D01G140700.1	Wheat	cytosol	48.54	41.61
KXG31606	Sorghum	cytosol	49.38	41.43
TraesCS3A01G313600.1	Wheat	cytosol	48.33	41.43
Solyc04g014690.2.1	Tomato	mitochondrion	32.5	41.38
Zm00001d008875_P001	Maize	cytosol	47.5	40.64
HORVU3Hr1G071240.2	Barley	cytosol	50.83	40.53
TraesCS3A01G274000.1	Wheat	cytosol	50.42	40.27
TraesCS3B01G307700.2	Wheat	cytosol	50.21	40.1
TraesCS3D01G273200.1	Wheat	cytosol	50.0	39.93
Zm00001d039427_P002	Maize	cytosol	47.71	39.9
Solyc11g012050.1.1	Tomato	mitochondrion	31.04	39.84
HORVU3Hr1G026870.1	Barley	cytosol	47.08	39.24
Zm00001d032310_P001	Maize	cytosol	48.54	38.96
Zm00001d000396_P001	Maize	cytosol	47.08	38.44
KXG22364	Sorghum	cytosol	48.54	38.32
OQU80422	Sorghum	cytosol	49.58	38.2
TraesCS1B01G351900.1	Wheat	nucleus	47.08	37.79
TraesCS1D01G341600.1	Wheat	nucleus	46.88	37.63
TraesCS1A01G339600.1	Wheat	cytosol	46.88	37.5
Solyc12g016140.1.1	Tomato	cytosol	17.92	37.23
Solyc07g042890.2.1	Tomato	cytosol	31.88	37.14
Solyc07g042680.2.1	Tomato	cytosol	31.46	36.65
HORVU1Hr1G076110.1	Barley	nucleus	45.83	36.61
Solyc12g016100.1.1	Tomato	cytosol	19.79	36.54
Solyc12g009340.1.1	Tomato	cytosol	30.42	36.5
Os05t0519200-02	Rice	cytosol	45.83	36.42
Os01t0747400-01	Rice	cytosol	48.33	36.42
Solyc12g015980.1.1	Tomato	cytosol	19.38	35.77
Solyc12g009350.1.1	Tomato	cytosol	19.38	35.77
GSMUA_Achr6P26170_001	Banana	cytosol	55.21	35.52
Zm00001d038809_P008	Maize	cytosol	48.12	34.79
Solyc09g018060.2.1	Tomato	cytosol	22.29	34.52
Solyc02g093410.2.1	Tomato	cytosol	24.79	33.71
Solyc02g085620.2.1	Tomato	cytosol	23.33	30.19
Solyc10g055720.1.1	Tomato	cytosol	31.67	27.0
Solyc01g111880.2.1	Tomato	cytosol	30.62	26.11
Solyc02g083290.2.1	Tomato	cytosol	28.33	24.2
Solyc12g094410.1.1	Tomato	cytosol	28.12	23.73
Solyc04g071120.2.1	Tomato	cytosol	26.67	23.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	UniProt:K4BE63	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581	PANTHER:PTHR44581:SF2	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc03g006400.2	EnsemblPlants:Solyc03g006400.2.1
UniParc:UPI00027679AF	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:996867..999265

Molecular Weight (calculated)

54515.3 Da

IEP (calculated)

9.846

GRAVY (calculated)

-0.511

Length

480 amino acids

Sequence
(BLAST)

001: MDEEATSWIR RTKFSHTICH RLDAARLSST TVSFQPRSIT GAKTRPGTTS LNSRPDPTVK QIQQNLSAKK QRALSPLPKT KLPDTFKEAR SNQRRFSTPH
101: PQRKGHEKGI VGKLFLKDSH EKKIASSSSA ISKSAAKFND KSKSRNWKDS AWTKYFDQNG RRVTAVETTD EYTVDLSKLF LGLRFAHGAH SQLYHGIYRD
201: EPVAVKMIKL PDDDDNGALA TRLENQFTRE VTLLSQLHHQ NVVKFVGACR KTPVFCVVTE YLSEGSLRAY LHKLEDKSIN LQKLIALALD IAHGMQYIHS
301: QGIIHRDLKP ENILIDENFH LKIADFGIAC EEAYCDLLAD DPGTYRWMAP EMIKRKSYGR KVDVYSFGLI LWEMVAGTVP YEDMTPVQAA FAVVNKNMRP
401: PIPGDCPLAM RTLIEQCWSL QPEKRPEFWQ IVKVLEQFES SVAHDGTLNL VQNSMFHHKK GFLHWIQKLG SAHQNASSKS

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.