Factsheet for TraesCS1D01G341600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS2A01G240200.1
TraesCS2A01G282200.1
TraesCS2B01G257800.1
TraesCS2B01G299400.1
TraesCS2D01G237900.1
TraesCS2D01G281000.1
TraesCS7A01G134600.1
TraesCS7B01G035800.1
TraesCS7D01G134000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	TraesCS2A01G282200.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2B01G299400.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2D01G281000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7A01G134600.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7B01G035800.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7D01G134000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2A01G240200.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2B01G257800.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2D01G237900.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G351900.1	Wheat	nucleus	98.66	98.66
TraesCS1A01G339600.1	Wheat	cytosol	98.33	98.0
HORVU1Hr1G076110.1	Barley	nucleus	94.65	94.18
Os05t0519200-02	Rice	cytosol	71.24	70.53
KXG22364	Sorghum	cytosol	68.23	67.11
Zm00001d000396_P001	Maize	cytosol	65.55	66.67
Zm00001d038809_P008	Maize	cytosol	64.21	57.83
TraesCS3D01G273200.1	Wheat	cytosol	53.01	52.75
GSMUA_Achr9P05820_001	Banana	cytosol	41.97	50.81
KRH21427	Soybean	cytosol	37.46	48.38
KRH10889	Soybean	cytosol	36.96	47.84
Solyc03g006400.2.1	Tomato	cytosol	37.63	46.88
PGSC0003DMT400033356	Potato	cytosol, plastid	37.79	46.69
CDX71145	Canola	cytosol, plastid	36.96	46.62
KRH50054	Soybean	cytosol, plastid	38.8	46.59
CDY32673	Canola	cytosol	37.29	46.46
GSMUA_Achr4P30980_001	Banana	cytosol	44.82	46.45
CDX80321	Canola	cytosol	36.79	46.32
CDX88676	Canola	cytosol, plastid	36.96	46.23
KRH20446	Soybean	cytosol, plastid	37.96	45.95
GSMUA_Achr10P...	Banana	cytosol	42.98	45.81
KRH27396	Soybean	cytosol	20.74	45.76
KRH13893	Soybean	cytosol	24.92	45.43
KRH13899	Soybean	cytosol	24.92	45.43
CDY32674	Canola	cytosol, plastid	36.96	45.29
PGSC0003DMT400076363	Potato	cytosol	37.96	45.04
CDY69707	Canola	cytosol, plastid	37.12	44.94
Bra006738.1-P	Field mustard	cytosol, plastid	37.79	44.93
CDY02848	Canola	cytosol	36.12	44.91
Solyc02g078140.2.1	Tomato	cytosol	37.79	44.84
Bra002606.1-P	Field mustard	cytosol, plastid	36.96	44.74
Bra020343.1-P	Field mustard	cytosol, plastid	37.79	44.14
KRH43461	Soybean	cytosol	24.08	43.9
GSMUA_Achr2P15610_001	Banana	cytosol	42.81	43.61
CDX99086	Canola	cytosol, plastid	32.27	43.37
AT5G58950.1	Thale cress	plastid	37.96	43.24
CDX86103	Canola	cytosol	33.28	42.7
Bra018183.1-P	Field mustard	cytosol	33.95	41.6
AT3G46930.2	Thale cress	cytosol	34.78	40.39
TraesCS3D01G010000.1	Wheat	cytosol	24.08	39.56
TraesCS3D01G140700.1	Wheat	cytosol	36.62	39.11
TraesCS7D01G384700.1	Wheat	mitochondrion	25.08	37.88
TraesCS6D01G161600.1	Wheat	mitochondrion	23.91	36.48
TraesCS2D01G588700.1	Wheat	cytosol	17.39	34.9
TraesCS6D01G192100.1	Wheat	cytosol	20.07	34.29
TraesCS6D01G145100.2	Wheat	cytosol	23.08	33.01
TraesCS7D01G289500.1	Wheat	cytosol	22.58	32.45
GSMUA_Achr6P26170_001	Banana	cytosol	39.97	32.04
TraesCS7D01G474700.1	Wheat	cytosol	22.58	31.76
TraesCS5D01G482000.1	Wheat	cytosol	18.56	26.55
TraesCS5D01G132600.2	Wheat	cytosol	22.74	25.81
TraesCS6D01G070000.1	Wheat	cytosol	23.75	24.57
TraesCS7D01G323500.1	Wheat	cytosol	20.74	23.13
TraesCS5D01G343000.1	Wheat	cytosol	22.74	22.59
TraesCS2D01G588200.1	Wheat	cytosol	21.07	21.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581
PANTHER:PTHR44581:SF1	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS1D01G341600	EnsemblPlants:TraesCS1D01G341600.1	TIGR:cd13999	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:431704054..431706736

Molecular Weight (calculated)

66495.3 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.472

Length

598 amino acids

Sequence
(BLAST)

001: MDEDEYSWVR RTKFSHSIVR SSSGRCSFDE QFSRRAVSIQ KDFDSELKSL QPRAKGAVSN PARPAIPRAK SAAGQADRKP KDVVFSDVQL KQHGAVGDGS
101: LKETSMMQDR REVGPKGNGL SLKSLDIPNR RIVRGLNDGS SGNTLEFSFH SEEQSLRLQR VCSSPGPYFA KDAGLAGDSN PRSVSFKVAG DGSKPKKRAK
201: SPIPTRVISD VFREAKAASK RFSSPQRQRK SSSVRLLDDS PPFAFSSTRA ASKLVTKRAS SWPRNSEARV AKVAALDVLE KWTVDRSQLL IGHRFASGAY
301: SRLFHGIYKE QPVAVKFIRL PDDGEDPELA ARLEKQFTVE VTILARLQHR NVIELVGACS SAPVFCVITE FLPGGSLRAY LRKLEGKQLP LEKIISVALD
401: ISRGLEYVHS QGVIHRDVKP ENILFDAECC AKVVDFGVAF EDVYCNTMED DPGTYRWMAP EMCKRKPYGP KVDVYSFGLV LWELVSGSIP YEEMTPLQAA
501: YAVVNKNLRP VVPSSCPTPL QQLMEQCWSA QPEKRPEFTQ IVKTLENLKA TLDRDGTIEK TSCQEAAQEQ NKNRLANWIL KLSYSPPDFS GPPPPKLL

Best Arabidopsis Sequence Match ( AT3G46930.2 )
(BLAST)

001: MDGEVTSWIR RANFSHTVCY RMITPSLESM PFTVNQEKSS GLKRMTLSSP SDLKSLVGIC QSTQQLTGLS CGSVVGTEVQ RNPVTNKKRS VSPLPHMALS
101: DAFIEAKSDI KRFSTPHPRR VEPEKGMKAK SSSRKDSSEK KSVNLRSLSH SGPIRDLSTQ KVKERGKSKI DKKSSKSVDY RGSKVSSAGV LEECLIDVSK
201: LSYGDRFAHG KYSQIYHGEY EGKAVALKII TAPEDSDDIF LGARLEKEFI VEATLLSRLS HPNVVKFVGV NTGNCIITEY VPRGSLRSYL HKLEQKSLPL
301: EQLIDFGLDI AKGMEYIHSR EIVHQDLKPE NVLIDNDFHL KIADFGIACE EEYCDVLGDN IGTYRWMAPE VLKRIPHGRK CDVYSFGLLL WEMVAGALPY
401: EEMKFAEQIA YAVIYKKIRP VIPTDCPAAM KELIERCWSS QTDKRPEFWQ IVKVLEHFKK SLTSEGKLNL LPSQICPELK KCPKFWIHIF GSFHHHSSGG
501: GSSSNNSALP KPKFA

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.