Factsheet for GSMUA_Achr4P30980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr2P17520_001
GSMUA_Achr4P21110_001
GSMUA_Achr4P28510_001
GSMUA_Achr6P08260_001
GSMUA_Achr6P16290_001
GSMUA_Achr7P16760_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	GSMUA_Achr6P08260_001	AT3G11590.1	21798944
AT5G58950.1	GSMUA_Achr6P16290_001	AT3G11590.1	21798944
AT5G58950.1	GSMUA_Achr2P17520_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr4P21110_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr4P28510_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr7P16760_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr11P...	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15610_001	Banana	cytosol	79.2	77.85
GSMUA_Achr10P...	Banana	cytosol	70.54	72.55
GSMUA_Achr9P05820_001	Banana	cytosol	55.29	64.57
KRH21427	Soybean	cytosol	49.91	62.2
KRH10889	Soybean	cytosol	49.74	62.12
KRH50054	Soybean	cytosol, plastid	52.17	60.44
KRH20446	Soybean	cytosol, plastid	51.47	60.12
Solyc03g006400.2.1	Tomato	cytosol	48.01	57.71
PGSC0003DMT400033356	Potato	cytosol, plastid	48.18	57.44
Solyc02g078140.2.1	Tomato	cytosol	49.91	57.14
PGSC0003DMT400076363	Potato	cytosol	49.74	56.94
OQU87530	Sorghum	cytosol	36.57	55.67
CDX71145	Canola	cytosol, plastid	45.58	55.49
CDX88676	Canola	cytosol, plastid	45.41	54.81
CDY32673	Canola	cytosol	45.41	54.58
CDX80321	Canola	cytosol	44.71	54.32
CDY69707	Canola	cytosol, plastid	45.58	53.24
Bra002606.1-P	Field mustard	cytosol, plastid	45.58	53.24
CDY32674	Canola	cytosol, plastid	44.89	53.07
Bra006738.1-P	Field mustard	cytosol, plastid	46.1	52.88
CDY02848	Canola	cytosol	43.33	51.98
KRH13899	Soybean	cytosol	29.29	51.52
KRH13893	Soybean	cytosol	29.29	51.52
KRH43461	Soybean	cytosol	29.12	51.22
Bra020343.1-P	Field mustard	cytosol, plastid	45.41	51.17
AT5G58950.1	Thale cress	plastid	45.58	50.1
KRH27396	Soybean	cytosol	23.4	49.82
Os01t0201200-01	Rice	nucleus	48.18	49.38
Zm00001d008875_P001	Maize	cytosol	46.97	48.31
KXG31606	Sorghum	cytosol	47.66	48.08
CDX99086	Canola	cytosol, plastid	36.92	47.87
Zm00001d039427_P002	Maize	cytosol	46.97	47.21
CDX86103	Canola	cytosol	37.95	47.0
TraesCS3D01G140700.1	Wheat	cytosol	45.41	46.79
GSMUA_AchrUn_...	Banana	cytosol	27.56	46.49
TraesCS3B01G158300.1	Wheat	nucleus	45.06	46.43
TraesCS3A01G313600.1	Wheat	cytosol	44.71	46.07
Bra018183.1-P	Field mustard	cytosol	38.82	45.9
GSMUA_Achr8P18690_001	Banana	cytosol	27.9	45.74
GSMUA_Achr1P09680_001	Banana	cytosol	26.86	45.32
TraesCS1B01G351900.1	Wheat	nucleus	46.62	44.98
TraesCS1A01G339600.1	Wheat	cytosol	46.62	44.83
TraesCS1D01G341600.1	Wheat	nucleus	46.45	44.82
HORVU3Hr1G026870.1	Barley	cytosol	44.54	44.62
HORVU1Hr1G076110.1	Barley	nucleus	46.45	44.59
Zm00001d032310_P001	Maize	cytosol	46.1	44.48
GSMUA_Achr2P22880_001	Banana	cytosol	27.38	44.38
Os05t0519200-02	Rice	cytosol	46.1	44.04
OQU80422	Sorghum	cytosol	47.14	43.66
HORVU3Hr1G071240.2	Barley	cytosol	45.41	43.52
Os01t0747400-01	Rice	cytosol	48.01	43.49
TraesCS3D01G273200.1	Wheat	cytosol	45.06	43.26
KXG22364	Sorghum	cytosol	45.58	43.26
TraesCS3B01G307700.2	Wheat	cytosol	44.89	43.09
TraesCS3A01G274000.1	Wheat	cytosol	44.54	42.76
Zm00001d000396_P001	Maize	cytosol	43.33	42.52
AT3G46930.2	Thale cress	cytosol	37.78	42.33
GSMUA_Achr6P26170_001	Banana	cytosol	53.21	41.15
GSMUA_AchrUn_...	Banana	cytosol	10.92	40.38
Zm00001d038809_P008	Maize	cytosol	45.06	39.16
GSMUA_Achr8P34140_001	Banana	extracellular, plasma membrane	18.2	37.91
GSMUA_Achr1P23740_001	Banana	cytosol	23.4	37.5
GSMUA_Achr10P...	Banana	cytosol	25.3	35.52
GSMUA_Achr6P06670_001	Banana	cytosol	21.14	34.66
GSMUA_Achr6P03680_001	Banana	cytosol	24.96	34.45
GSMUA_Achr7P15770_001	Banana	cytosol	24.78	34.29
GSMUA_Achr9P01860_001	Banana	cytosol	20.8	34.19
GSMUA_Achr7P04900_001	Banana	cytosol	24.61	34.13
GSMUA_Achr4P20740_001	Banana	cytosol	22.01	33.25
GSMUA_Achr10P...	Banana	cytosol	20.8	31.41
GSMUA_Achr1P26270_001	Banana	cytosol	12.3	31.28
GSMUA_Achr4P18600_001	Banana	cytosol	20.1	30.69
GSMUA_AchrUn_...	Banana	cytosol	10.75	29.11
GSMUA_Achr9P08830_001	Banana	cytosol	24.26	26.62
GSMUA_Achr6P25310_001	Banana	cytosol	23.57	26.05
GSMUA_Achr4P04890_001	Banana	cytosol	24.26	25.18
GSMUA_Achr7P03190_001	Banana	cytosol	22.53	22.11
GSMUA_Achr7P03940_001	Banana	cytosol	14.9	19.28
GSMUA_Achr1P14940_001	Banana	cytosol	15.08	19.12
GSMUA_Achr1P26280_001	Banana	cytosol	5.2	12.66
GSMUA_Achr8P34130_001	Banana	cytosol	5.55	12.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G30980_001
EnsemblPlants:GSMUA_Achr4P30980_001	EnsemblPlants:GSMUA_Achr4T30980_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0STL0	PFAM:PF07714
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029652C0	SEG:seg	:

Description

protein kinase domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G30980_001]

Coordinates

chr4:-:28343234..28346918

Molecular Weight (calculated)

64824.0 Da

IEP (calculated)

9.700

GRAVY (calculated)

-0.421

Length

577 amino acids

Sequence
(BLAST)

001: MEEDGSSWVR RAKFSHTVCH RLDSAKLPSI PLLVRSESSL ELKPRRTAEA SVSLPVNRGA APKATGSITH STSLPSLHLL LQDGHHGIKT EKSSSVIPTS
101: LHSEQVPKTG PRSSNSGTTL FSRPSIKSHL NSHSQKSGTY MDWKKFKPKQ RSASPLPRTS ISDVFREAKA NKKRFSTPPP KRRGSDKSAF SKLFSREVHD
201: HVIFHSPPPE TSPLHHFSLM KESDKHESQK EALWTRYFEH GGGKVNAVEA LEEWMVDLSQ LYLGHRFASG AHSKLHHGIY KDQPVAVKFI RQPDDDENGM
301: MTARLEKQFT REVTLLSHLY HRNVIKLIAA FKKPPVFCII TEFLSGGSLR AFLHKLEHKS VPLQKLIMIA LDIARGMEYI HSQGVIHRDL KPANILFDQE
401: LCVKIADFGI ACEEAYCDTL AEDPGTFRWM APEMIKHKPY GHKVDVYSFG LVLLEMATGS IPYEEMTPIQ AAFAVANKNL RPVVPPECPA ALRALIEQCW
501: ALQPDKRPDF WQIVKVLEQF ESALAQNGTL DTVANMNCED HKNRLLHWIQ KLKPTHADGY GSGLPITKLS PSMPKLL

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.