Factsheet for GSMUA_Achr2P17520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr1P04750_001
GSMUA_Achr1P26670_001
GSMUA_Achr2P17920_001
GSMUA_Achr3P06040_001
GSMUA_Achr3P10380_001
GSMUA_Achr3P17130_001
GSMUA_Achr3P18350_001
GSMUA_Achr4P04810_001
GSMUA_Achr4P17750_001
GSMUA_Achr4P24550_001
GSMUA_Achr5P03230_001
GSMUA_Achr5P23980_001
GSMUA_Achr6P08950_001
GSMUA_Achr6P18380_001
GSMUA_Achr6P32500_001
GSMUA_Achr7P23620_001
GSMUA_Achr8P28640_001
GSMUA_Achr8P33740_001
GSMUA_Achr9P02010_001
GSMUA_Achr9P07620_001
GSMUA_Achr9P10710_001
GSMUA_Achr9P16490_001
GSMUA_Achr9P18270_001
GSMUA_Achr9P22710_001
GSMUA_Achr9P28200_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22960.1	GSMUA_Achr10P...	AT1G19680.1	21798944
AT3G22960.1	GSMUA_Achr4P24550_001	AT1G19680.1	21798944
AT3G22960.1	GSMUA_Achr6P08950_001	AT1G19680.1	21798944
AT3G22960.1	GSMUA_Achr3P06040_001	AT1G60010.1	21798944
AT3G22960.1	GSMUA_Achr3P10380_001	AT1G60010.1	21798944
AT3G22960.1	GSMUA_Achr5P23980_001	AT1G60010.1	21798944
AT3G22960.1	GSMUA_Achr9P18270_001	AT1G60010.1	21798944
AT3G22960.1	GSMUA_Achr9P28200_001	AT1G60010.1	21798944
AT3G22960.1	GSMUA_Achr2P17920_001	AT1G61590.1	21798944
AT3G22960.1	GSMUA_Achr4P17750_001	AT2G30580.1	21798944
AT3G22960.1	GSMUA_Achr5P03230_001	AT2G30580.1	21798944
AT3G22960.1	GSMUA_Achr9P10710_001	AT2G30580.1	21798944
AT3G22960.1	GSMUA_Achr3P17130_001	AT3G01690.1	21798944
AT3G22960.1	GSMUA_Achr8P28640_001	AT3G01690.1	21798944
AT3G22960.1	GSMUA_Achr9P02010_001	AT3G01690.1	21798944
AT3G22960.1	GSMUA_Achr9P07620_001	AT3G01690.1	21798944
AT3G22960.1	GSMUA_Achr9P22710_001	AT3G01690.1	21798944
AT3G22960.1	GSMUA_Achr1P26670_001	AT3G56130.1	21798944
AT3G22960.1	GSMUA_Achr8P33740_001	AT3G56130.1	21798944
AT3G22960.1	GSMUA_Achr9P16490_001	AT3G56130.1	21798944
AT3G22960.1	GSMUA_Achr10P...	AT3G59920.1	21798944
AT3G22960.1	GSMUA_Achr6P18380_001	AT3G59920.1	21798944
AT3G22960.1	GSMUA_Achr7P23620_001	AT3G59920.1	21798944
AT3G22960.1	GSMUA_Achr4P04810_001	AT3G60360.1	21798944
AT3G22960.1	GSMUA_Achr6P32500_001	AT3G60360.1	21798944
AT3G22960.1	GSMUA_Achr3P18350_001	AT5G04600.1	21798944
AT3G22960.1	GSMUA_AchrUn_...	AT5G04600.1	21798944
AT3G22960.1	GSMUA_Achr3P17130_001	AT5G14390.1	21798944
AT3G22960.1	GSMUA_Achr8P28640_001	AT5G14390.1	21798944
AT3G22960.1	GSMUA_Achr9P02010_001	AT5G14390.1	21798944
AT3G22960.1	GSMUA_Achr9P07620_001	AT5G14390.1	21798944
AT3G22960.1	GSMUA_Achr9P22710_001	AT5G14390.1	21798944
AT3G22960.1	GSMUA_Achr1P04750_001	AT5G14660.1	21798944
AT3G22960.1	GSMUA_Achr10P...	AT5G35410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16760_001	Banana	cytosol	36.36	95.6
GSMUA_Achr4P21110_001	Banana	cytosol	92.11	92.11
GSMUA_Achr4P28510_001	Banana	cytosol	91.87	91.87
KRG92440	Soybean	cytosol, nucleus	88.28	81.28
KRH34357	Soybean	nucleus	87.8	77.26
VIT_05s0020g04480.t01	Wine grape	plastid	90.67	64.68
Bra001896.1-P	Field mustard	plastid	87.32	64.6
Bra023780.1-P	Field mustard	plastid	87.32	63.26
CDY35484	Canola	plastid	87.32	63.26
CDY40829	Canola	plastid	87.32	63.26
CDX92969	Canola	plastid	86.6	62.96
AT3G22960.1	Thale cress	plastid	88.76	62.25
Solyc09g082970.2.1	Tomato	plastid	88.28	62.23
CDX94878	Canola	plastid	86.36	62.13
VIT_00s0179g00350.t01	Wine grape	plastid	81.58	59.93
GSMUA_Achr8P14820_001	Banana	mitochondrion	43.06	36.89
GSMUA_AchrUn_...	Banana	cytosol	19.14	36.87
GSMUA_Achr4P28890_001	Banana	cytosol	42.58	36.63
GSMUA_Achr4P21740_001	Banana	plastid	41.87	30.86
GSMUA_Achr7P24720_001	Banana	plastid	44.02	30.51
GSMUA_Achr2P03840_001	Banana	cytosol	27.51	29.26
GSMUA_Achr10P...	Banana	mitochondrion	28.71	26.61
GSMUA_AchrUn_...	Banana	cytosol	28.71	26.49
GSMUA_Achr7P21700_001	Banana	mitochondrion	27.03	26.28
GSMUA_Achr8P01620_001	Banana	cytosol	18.9	24.92
GSMUA_Achr5P27680_001	Banana	plasma membrane	29.67	24.75
GSMUA_Achr3P27180_001	Banana	cytosol	27.27	24.26
GSMUA_Achr8P13860_001	Banana	mitochondrion	28.23	23.18
GSMUA_Achr9P23750_001	Banana	cytosol	27.51	22.91
GSMUA_Achr11P...	Banana	plastid	23.92	19.46
GSMUA_Achr10P...	Banana	cytosol	24.4	19.35
GSMUA_Achr6P13430_001	Banana	cytosol	23.92	18.9
GSMUA_Achr9P08410_001	Banana	cytoskeleton, peroxisome, plastid	22.73	18.06
GSMUA_Achr2P20210_001	Banana	plastid	23.21	17.77
GSMUA_Achr6P16340_001	Banana	cytosol	8.85	15.88
GSMUA_Achr7P10730_001	Banana	plastid	15.79	10.54
GSMUA_Achr1P24790_001	Banana	mitochondrion, plastid	14.35	10.29
GSMUA_Achr8P01600_001	Banana	mitochondrion	7.66	10.22
GSMUA_Achr6P36810_001	Banana	mitochondrion	2.15	9.47

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	MapMan:3.12.8	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	MapMan:5.1.2.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743
GO:GO:0005488	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0030955	EnsemblPlantsGene:GSMUA_Achr2G17520_001	EnsemblPlants:GSMUA_Achr2P17520_001	EnsemblPlants:GSMUA_Achr2T17520_001	InterPro:IPR015806
InterPro:IPR036918	UniProt:M0S8U3	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	ScanProsite:PS00110
PANTHER:PTHR11817	PANTHER:PTHR11817:SF14	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS
InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621
SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniParc:UPI0002967B50	:	:	:

Description

Pyruvate kinase isozyme A, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G17520_001]

Coordinates

chr2:-:18037694..18045885

Molecular Weight (calculated)

46376.9 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.057

Length

418 amino acids

Sequence
(BLAST)

001: MMDTEGSEIH MGDLGGAASA KAEDGEIWTF SVRSFNSPLP ERTIHVNYDG FAEDVKVCDE LLVDGGMVRF EVIEKIGPDV KCLCTDPGLL LPRANLTFWR
101: DGSLVRERNA MLPTISSKDW LDIDFGIAEG VDFIAVSFVK SAEVINHLKS YIAARCRDRE IAVVAKIESI DSLKNLEEII RASDGAMVAR GDLGAQIPLE
201: QVPSAQQKIV KLCRQLNKPV IVASQLLDSM IEYPTPTRAE VADVSEAVRQ RADALMLSGE SAMGQYPEKA LIVLRSVSLR IERWWREEKR HEGMELPDIT
301: SSFSDKISEE ICNSAAKMAN TLGVDAVFVY TKTGHMASLL SRCRPDCPIF AFTSSTSVRR RLNLQWGLIP FRLSFSDDME SNLNRTFSLL KARGMIQSGD
401: LVIALSDMLQ SIQVMHVP

Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)

001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP

Arabidopsis Description

PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.