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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG93968
KRG94095
KRG94880
KRG95629
KRG97587
KRG97672
KRG99257
KRH03685
KRH05863
KRH07089
KRH07729
KRH15146
KRH20252
KRH31200
KRH31287
KRH32110
KRH38103
KRH40007
KRH42233
KRH43030
KRH45741
KRH51797
KRH58237
KRH58350
KRH59137
KRH61121
KRH67309
KRH69484
KRH71326
KRH71854
KRH74672

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G22960.1 KRH05863 AT1G19680.1 21798944
AT3G22960.1 KRH15146 AT1G19680.1 21798944
AT3G22960.1 KRH51797 AT1G19680.1 21798944
AT3G22960.1 KRH61121 AT1G19680.1 21798944
AT3G22960.1 KRG99257 AT1G60010.1 21798944
AT3G22960.1 KRH45741 AT1G60010.1 21798944
AT3G22960.1 KRH69484 AT1G60010.1 21798944
AT3G22960.1 KRH74672 AT1G60010.1 21798944
AT3G22960.1 KRH07729 AT1G61590.1 21798944
AT3G22960.1 KRG95629 AT2G30580.1 21798944
AT3G22960.1 KRH32110 AT2G30580.1 21798944
AT3G22960.1 KRH67309 AT2G30580.1 21798944
AT3G22960.1 KRH71326 AT2G30580.1 21798944
AT3G22960.1 KRG93968 AT3G01690.1 21798944
AT3G22960.1 KRH07089 AT3G01690.1 21798944
AT3G22960.1 KRH58237 AT3G01690.1 21798944
AT3G22960.1 KRG97672 AT3G56130.1 21798944
AT3G22960.1 KRH31200 AT3G56130.1 21798944
AT3G22960.1 KRH43030 AT3G59920.1 21798944
AT3G22960.1 KRH59137 AT3G59920.1 21798944
AT3G22960.1 KRH42233 AT3G60360.1 21798944
AT3G22960.1 KRH58350 AT3G60360.1 21798944
AT3G22960.1 KRH38103 AT5G04600.1 21798944
AT3G22960.1 KRH40007 AT5G04600.1 21798944
AT3G22960.1 KRH71854 AT5G04600.1 21798944
AT3G22960.1 KRG97587 AT5G10210.1 21798944
AT3G22960.1 KRH31287 AT5G10210.1 21798944
AT3G22960.1 KRG93968 AT5G14390.1 21798944
AT3G22960.1 KRH07089 AT5G14390.1 21798944
AT3G22960.1 KRH58237 AT5G14390.1 21798944
AT3G22960.1 KRG94095 AT5G14660.1 21798944
AT3G22960.1 KRG94880 AT5G14660.1 21798944
AT3G22960.1 KRH03685 AT5G35410.1 21798944
AT3G22960.1 KRH20252 AT5G35410.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34357 Soybean nucleus 98.02 93.68
GSMUA_Achr7P16760_001 Banana cytosol 31.06 88.68
GSMUA_Achr2P17520_001 Banana cytosol 81.28 88.28
GSMUA_Achr4P28510_001 Banana cytosol 80.84 87.8
GSMUA_Achr4P21110_001 Banana cytosol 80.4 87.32
VIT_05s0020g04480.t01 Wine grape plastid 90.53 70.14
Bra001896.1-P Field mustard plastid 87.22 70.09
Os07t0181000-01 Rice plastid 86.56 70.05
CDX92969 Canola plastid 86.34 68.17
CDY40829 Canola plastid 86.12 67.76
CDY35484 Canola plastid 86.12 67.76
Bra023780.1-P Field mustard plastid 86.12 67.76
EER95951 Sorghum plastid 86.78 67.58
Zm00001d034443_P001 Maize plastid 85.02 67.25
CDX94878 Canola plastid 85.9 67.13
TraesCS2D01G237900.1 Wheat plastid 84.14 67.02
TraesCS2A01G240200.1 Wheat plastid 84.14 67.02
AT3G22960.1 Thale cress plastid 87.22 66.44
Solyc09g082970.2.1 Tomato plastid 86.78 66.44
KXG37365 Sorghum plastid 84.58 66.44
Zm00001d018961_P002 Maize plastid 86.56 63.49
HORVU2Hr1G050140.1 Barley plastid 83.48 62.75
TraesCS2B01G257800.1 Wheat plastid 82.38 60.62
KRG91145 Soybean plastid 58.81 45.88
KRH35631 Soybean plastid 58.81 45.88
KRH38304 Soybean cytosol 34.8 45.66
KRH44705 Soybean cytosol 18.06 41.84
KRH70138 Soybean cytosol 8.37 39.18
KRH18451 Soybean cytosol 21.81 38.82
KRH77227 Soybean plastid 43.17 35.96
KRH28271 Soybean cytosol 20.48 35.77
KRG91615 Soybean nucleus 44.05 34.78
KRH35201 Soybean plastid 44.05 34.6
KRH08770 Soybean nucleus, plastid 43.83 34.49
KRG89466 Soybean endoplasmic reticulum, nucleus 31.28 28.29
KRH50504 Soybean mitochondrion 30.84 27.94
KRG93166 Soybean cytosol 30.4 27.06
KRH56500 Soybean nucleus 30.4 27.01
KRH08482 Soybean cytosol 29.52 26.07
KRH70137 Soybean cytosol, endoplasmic reticulum 23.13 25.55
KRH24949 Soybean cytosol, peroxisome, plastid 27.53 23.28
KRH34711 Soybean endoplasmic reticulum 25.55 22.05
KRG92070 Soybean endoplasmic reticulum, nucleus 25.33 21.86
KRH20011 Soybean nucleus 24.67 21.25
KRH67815 Soybean cytosol, endoplasmic reticulum 24.45 21.06
KRH32634 Soybean endoplasmic reticulum 24.23 20.87
KRG96114 Soybean cytosol 24.23 20.3
KRH71730 Soybean endoplasmic reticulum 8.59 20.21
KRH57981 Soybean cytosol 12.33 18.48
KRH38305 Soybean plastid 9.25 18.26
KRH57945 Soybean cytosol, endoplasmic reticulum 7.71 18.23
KRH71733 Soybean cytosol 4.19 13.57
Protein Annotations
KEGG:00010+2.7.1.40KEGG:00230+2.7.1.40KEGG:00620+2.7.1.40Gene3D:2.40.33.10MapMan:3.12.8Gene3D:3.20.20.60
Gene3D:3.40.1380.20MapMan:5.1.2.1UniProt:A0A0R0EQG6EMBL:ACUP02012759EnsemblPlantsGene:GLYMA_20G211200GO:GO:0000287
GO:GO:0003674GO:GO:0003824GO:GO:0004743GO:GO:0005488GO:GO:0005975GO:GO:0006091
GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058
GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0030955InterPro:IPR015806
InterPro:IPR036918EnsemblPlants:KRG92440ProteinID:KRG92440ProteinID:KRG92440.1PFAM:PF00224PFAM:PF02887
PRINTS:PR01050ScanProsite:PS00110PANTHER:PTHR11817PANTHER:PTHR11817:SF14MetaCyc:PWY-1042MetaCyc:PWY-2221
MetaCyc:PWY-5484MetaCyc:PWY-5723MetaCyc:PWY-6142MetaCyc:PWY-6886MetaCyc:PWY-6901MetaCyc:PWY-7003
MetaCyc:PWY-7218MetaCyc:PWY-7383InterPro:Pyr_KnaseInterPro:Pyrv/PenolPyrv_Kinase-like_domInterPro:Pyrv_Knase-like_insert_dom_sfInterPro:Pyrv_Knase_AS
InterPro:Pyrv_Knase_CInterPro:Pyrv_Knase_C_sfInterPro:Pyrv_Knase_brlInterPro:Pyrv_Knase_insert_dom_sfSUPFAM:SSF50800SUPFAM:SSF51621
SUPFAM:SSF52935TIGRFAMs:TIGR01064UniParc:UPI00023DC289:::
Description
hypothetical protein
Coordinates
chr20:-:44792534..44799703
Molecular Weight (calculated)
50627.0 Da
IEP (calculated)
5.569
GRAVY (calculated)
-0.088
Length
454 amino acids
Sequence
(BLAST)
001: MNVARINMCH GTREWHKEVI DRVRRLNHEK GFAVAIMMDT EGSEIHMGDL GGASSAKADD GEIWTFSVRA FDSALPQRTI NVNYEGFAED VKVGDELLVD
101: GGMVRFEVIQ KIGPDVKCRC TDPGLLLPRA NLTFWRNGSL VRERNAMLPT ISSKDWLDID FGISEGVDFI AISFVKSAEV ITHLKSYIAA RSRDSDISVI
201: AKIESIDSLK NLEEIVLAAD GAMVARGDLG AQIPLEQVPS AQQRIVQVCR QLNKPVIVAS QLLESMIEYP TPTRAEVADV SEAVRQRADA LMLSGESAMG
301: QYPDKALTVL RSVSLRIERW WREEKRYEAM LLPSVGSYFS EKISEEICNS AAKMANNLEV DALFVYTKTG HMASLLSRCR PDCPIFAFTT TSSVRRRLNL
401: QWGLIPFRLS FTDDMESNLN RTFSLLKARN LIKSGDLVIA VSDMLQSIQV MNVP
Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)
001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP
Arabidopsis Description
PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.