Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 6
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid
BaCelLo:plastid
EpiLoc:plastid
MultiLoc:plastid
Plant-mPloc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH25933
KRH27891

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36580.1 KRH25933 AT1G63970.1 21798944
AT2G36580.1 KRH27891 AT1G63970.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH20011 Soybean nucleus 98.86 98.86
KRH67815 Soybean cytosol, endoplasmic reticulum 94.12 94.12
KRH57945 Soybean cytosol, endoplasmic reticulum 34.16 93.75
VIT_08s0007g04170.t01 Wine grape plastid 88.99 91.25
KRG96114 Soybean cytosol 93.36 90.77
Os11t0148500-02 Rice plasma membrane 90.7 90.7
GSMUA_Achr10P... Banana cytosol 90.51 90.51
AT3G52990.1 Thale cress cytosol, plastid 89.94 89.94
CDY58286 Canola cytosol, plastid 89.94 89.94
Bra028545.1-P Field mustard cytosol, plastid 89.94 89.94
CDX73585 Canola cytosol, plastid 89.94 89.94
CDX78139 Canola cytosol, plastid 89.75 89.75
Bra006965.1-P Field mustard cytosol, plastid 89.75 89.75
Bra019634.1-P Field mustard cytosol, plastid 89.75 89.75
CDY13321 Canola cytosol, plastid 89.75 89.75
AT2G36580.1 Thale cress cytosol, peroxisome, plastid 89.75 89.75
Os12t0145700-01 Rice plasma membrane 89.56 89.56
CDX67554 Canola cytosol, plastid 89.56 89.56
CDX76243 Canola cytosol, plastid 89.56 89.56
Zm00001d023379_P001 Maize extracellular, plasma membrane 89.37 89.37
KXG22956 Sorghum cytosol, peroxisome, plastid 89.37 89.37
EES09257 Sorghum cytosol, peroxisome, plastid 89.37 89.37
GSMUA_Achr11P... Banana plastid 87.1 89.3
TraesCS5D01G138800.1 Wheat cytosol 88.99 88.99
TraesCS5A01G131100.1 Wheat golgi 88.99 88.99
Zm00001d052494_P001 Maize plasma membrane 88.8 88.8
TraesCS5B01G131000.1 Wheat golgi, unclear 88.8 88.8
HORVU5Hr1G041120.7 Barley cytosol 88.8 88.47
PGSC0003DMT400072411 Potato cytosol 83.68 88.38
Solyc10g083720.1.1 Tomato plastid 88.24 88.24
GSMUA_Achr6P13430_001 Banana cytosol 88.05 87.71
PGSC0003DMT400006945 Potato mitochondrion 82.92 87.58
Solyc09g008840.2.1 Tomato unclear 87.1 87.1
KRH71730 Soybean endoplasmic reticulum 31.69 86.53
GSMUA_Achr2P20210_001 Banana plastid 87.29 84.25
KRG92070 Soybean endoplasmic reticulum, nucleus 83.3 83.46
KRH34711 Soybean endoplasmic reticulum 83.11 83.27
KRH71733 Soybean cytosol 21.63 81.43
KRH57981 Soybean cytosol 40.04 69.64
KRG93166 Soybean cytosol 41.94 43.33
KRH70138 Soybean cytosol 7.97 43.3
KRH56500 Soybean nucleus 41.94 43.25
KRH50504 Soybean mitochondrion 40.61 42.71
KRG89466 Soybean endoplasmic reticulum, nucleus 40.42 42.43
KRH08482 Soybean cytosol 38.71 39.69
KRH70137 Soybean cytosol, endoplasmic reticulum 27.32 35.04
KRH38304 Soybean cytosol 17.27 26.3
KRH44705 Soybean cytosol 9.68 26.02
KRH18451 Soybean cytosol 12.14 25.1
KRG92440 Soybean cytosol, nucleus 20.87 24.23
KRH34357 Soybean nucleus 21.63 24.0
KRG91615 Soybean nucleus 25.81 23.65
KRH35201 Soybean plastid 25.81 23.53
KRH77227 Soybean plastid 23.91 23.12
KRH08770 Soybean nucleus, plastid 24.67 22.53
KRG91145 Soybean plastid 24.48 22.16
KRH35631 Soybean plastid 24.29 21.99
KRH28271 Soybean cytosol 10.82 21.92
KRH24949 Soybean cytosol, peroxisome, plastid 17.84 17.5
KRH38305 Soybean plastid 7.59 17.39
Protein Annotations
KEGG:00010+2.7.1.40KEGG:00230+2.7.1.40KEGG:00620+2.7.1.40EntrezGene:100801466Gene3D:2.40.33.10Gene3D:3.20.20.60
Gene3D:3.40.1380.20MapMan:50.2.7EMBL:ACUP02006145EnsemblPlantsGene:GLYMA_10G065000GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0004743GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0030955UniProt:I1L964InterPro:IPR015806InterPro:IPR036918EnsemblPlants:KRH32634
ProteinID:KRH32634ProteinID:KRH32634.1PFAM:PF00224PFAM:PF02887PRINTS:PR01050PANTHER:PTHR11817
PANTHER:PTHR11817:SF38MetaCyc:PWY-1042MetaCyc:PWY-2221MetaCyc:PWY-5484MetaCyc:PWY-5723MetaCyc:PWY-6142
MetaCyc:PWY-6886MetaCyc:PWY-6901MetaCyc:PWY-7003MetaCyc:PWY-7218MetaCyc:PWY-7383InterPro:Pyr_Knase
InterPro:Pyrv/PenolPyrv_Kinase-like_domInterPro:Pyrv_Knase-like_insert_dom_sfInterPro:Pyrv_Knase_CInterPro:Pyrv_Knase_C_sfInterPro:Pyrv_Knase_brlInterPro:Pyrv_Knase_insert_dom_sf
SUPFAM:SSF50800SUPFAM:SSF51621SUPFAM:SSF52935TIGRFAMs:TIGR01064UniParc:UPI000233CA9D:
Description
hypothetical protein
Coordinates
chr10:-:6209769..6215999
Molecular Weight (calculated)
57649.9 Da
IEP (calculated)
7.573
GRAVY (calculated)
0.013
Length
527 amino acids
Sequence
(BLAST)
001: MPSSHLLLEE PIRMVSILEP SKPSFFSAMT KIVGTLGPKS RSVETISGCL KAGMSVARFD FSWHDPEYHQ ETLENLKAAI KSTKKLCAVM LDTVGAEMQV
101: VNKSERAISL EANGLVVLTP DQGQEASSEI LPINFDGLAK AVKKGDTIFI GQYLFTGSET TSVWLEVSEV KGQDVVCIIK NTATLAGSLF TLHASQIHID
201: LPTLTEKDKE VISTWGVKNK IDFLSLSYTR HAKDVRQARE FLSKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKSAL
301: YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPIETI STVGRICSEA EKVFNQDLYF KRTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SIIICFTSSG RAARLIAKYR PTMPVLSVVI PRLKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESILK VALDHGKSLG
501: VIKSHDRVVV CQKLGDASVV KIIELED
Best Arabidopsis Sequence Match ( AT3G52990.1 )
(BLAST)
001: MHSSHLLLEE PIRMASILEP SKSSFFPALT KIVGTLGPKS RSVEALSGCL KAGMSVARFD FSWGDADYHQ ETLDNLKVAV RSTKKLCAVM LDTVGPELQV
101: INKSEKAITL KADGLVTLTP NQDQEASSEV LPINFNGLAK AVKKGDTIFV GQYLFTGSET TSVWLEVDEV KGDDVICLSR NAATLAGSLF TLHSSQVHID
201: LPTLTEKDKE VISTWGVQNK IDFLSLSYCR HAEDVRQTRE MLKKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKAAL
301: YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYF KKTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVISVVI PRVKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESVLK VALDHGKHAG
501: VIKSHDRVVV CQKVGDASVV KIIELED
Arabidopsis Description
Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q94KE3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.