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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear

Predictor Summary:
  • cytosol 2
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, unclear
Any Predictor:cytosol, peroxisome
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:cytosol
YLoc:peroxisome
 golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS6A01G258500.1
TraesCS6D01G239700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36580.1 TraesCS6A01G258500.1 AT1G63970.1 21798944
AT2G36580.1 TraesCS6D01G239700.1 AT1G63970.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G138800.1 Wheat cytosol 99.81 99.81
TraesCS5A01G131100.1 Wheat golgi 99.81 99.81
HORVU5Hr1G041120.7 Barley cytosol 99.62 99.24
EES09257 Sorghum cytosol, peroxisome, plastid 95.45 95.45
Zm00001d052494_P001 Maize plasma membrane 94.5 94.5
Zm00001d023379_P001 Maize extracellular, plasma membrane 94.5 94.5
KXG22956 Sorghum cytosol, peroxisome, plastid 94.5 94.5
Os11t0148500-02 Rice plasma membrane 94.31 94.31
Os12t0145700-01 Rice plasma membrane 92.98 92.98
KRH67815 Soybean cytosol, endoplasmic reticulum 89.75 89.75
PGSC0003DMT400072411 Potato cytosol 84.63 89.38
VIT_08s0007g04170.t01 Wine grape plastid 87.1 89.3
Solyc10g083720.1.1 Tomato plastid 88.99 88.99
KRH20011 Soybean nucleus 88.99 88.99
KRH32634 Soybean endoplasmic reticulum 88.8 88.8
GSMUA_Achr10P... Banana cytosol 88.05 88.05
GSMUA_Achr11P... Banana plastid 85.01 87.16
KRG96114 Soybean cytosol 89.37 86.9
AT3G52990.1 Thale cress cytosol, plastid 86.72 86.72
CDX73585 Canola cytosol, plastid 86.53 86.53
GSMUA_Achr6P13430_001 Banana cytosol 86.72 86.39
CDX78139 Canola cytosol, plastid 86.34 86.34
Bra006965.1-P Field mustard cytosol, plastid 86.34 86.34
Bra028545.1-P Field mustard cytosol, plastid 86.34 86.34
PGSC0003DMT400006945 Potato mitochondrion 81.59 86.17
CDY13321 Canola cytosol, plastid 86.15 86.15
Solyc09g008840.2.1 Tomato unclear 86.15 86.15
AT2G36580.1 Thale cress cytosol, peroxisome, plastid 85.96 85.96
CDX67554 Canola cytosol, plastid 85.96 85.96
CDY58286 Canola cytosol, plastid 85.77 85.77
Bra019634.1-P Field mustard cytosol, plastid 85.77 85.77
CDX76243 Canola cytosol, plastid 85.58 85.58
GSMUA_Achr2P20210_001 Banana plastid 86.34 83.33
KRH57945 Soybean cytosol, endoplasmic reticulum 30.17 82.81
KRH57981 Soybean cytosol 38.33 66.67
TraesCS4B01G107200.4 Wheat cytosol 62.62 58.1
TraesCS4B01G174700.1 Wheat cytosol 40.23 41.65
TraesCS2B01G591300.1 Wheat cytosol 39.28 40.27
TraesCS3B01G218500.1 Wheat mitochondrion 38.71 39.01
TraesCS3B01G267800.2 Wheat plastid 24.67 22.53
TraesCS1B01G226500.1 Wheat plastid 23.15 21.63
TraesCS4B01G021300.1 Wheat plastid 22.2 21.59
TraesCS2B01G257800.1 Wheat plastid 23.34 19.94
Protein Annotations
KEGG:00010+2.7.1.40KEGG:00230+2.7.1.40KEGG:00620+2.7.1.40Gene3D:2.40.33.10Gene3D:3.20.20.60Gene3D:3.40.1380.20
MapMan:50.2.7GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004743GO:GO:0005488
GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030955InterPro:IPR015806
InterPro:IPR036918PFAM:PF00224PFAM:PF02887PRINTS:PR01050PANTHER:PTHR11817PANTHER:PTHR11817:SF38
InterPro:Pyr_KnaseInterPro:Pyrv/PenolPyrv_Kinase-like_domInterPro:Pyrv_Knase-like_insert_dom_sfInterPro:Pyrv_Knase_CInterPro:Pyrv_Knase_C_sfInterPro:Pyrv_Knase_brl
InterPro:Pyrv_Knase_insert_dom_sfSUPFAM:SSF50800SUPFAM:SSF51621SUPFAM:SSF52935TIGRFAMs:TIGR01064EnsemblPlantsGene:TraesCS5B01G131000
EnsemblPlants:TraesCS5B01G131000.1:::::
Description
No Description!
Coordinates
chr5B:+:243743770..243749052
Molecular Weight (calculated)
57423.5 Da
IEP (calculated)
6.944
GRAVY (calculated)
0.026
Length
527 amino acids
Sequence
(BLAST)
001: MHSTNLLLEE PIRMVSILEP SKPNFFPAMT KIVGTLGPKS RSVEAISACL KAGMSVARFD FSWGDAAYHQ ETLENLKLAI KATKKLCAVM LDTVGPELQV
101: VNKSEVTISL EENESVVLTP HKGQEASSKL LPINFAGLAK AVKPGATIFV GQYLFTGSET TSVWLEVSEV QGDDVVCVIK NSATLAGSLF TLHCSQIHID
201: MPTLSDEDKD VMKKWGAPNK IDFLSLSYTR HAEDVRQARE FLSKLGDLSQ TLIFAKIENV EGLNHFDEIL EEADGIILSR GNLGIDLPPE KVFLFQKSAL
301: HKCNMAGKPA VVTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYF KRTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVLSVVI PRLKTNQLKW SFTGAFEARQ SLIVRGLFPM LADPRHPAES TSTTNESVLK VALDHGKASG
501: VIKSHDRVVV CQKVGDSSVV KIIELDD
Best Arabidopsis Sequence Match ( AT3G52990.1 )
(BLAST)
001: MHSSHLLLEE PIRMASILEP SKSSFFPALT KIVGTLGPKS RSVEALSGCL KAGMSVARFD FSWGDADYHQ ETLDNLKVAV RSTKKLCAVM LDTVGPELQV
101: INKSEKAITL KADGLVTLTP NQDQEASSEV LPINFNGLAK AVKKGDTIFV GQYLFTGSET TSVWLEVDEV KGDDVICLSR NAATLAGSLF TLHSSQVHID
201: LPTLTEKDKE VISTWGVQNK IDFLSLSYCR HAEDVRQTRE MLKKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKAAL
301: YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYF KKTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVISVVI PRVKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESVLK VALDHGKHAG
501: VIKSHDRVVV CQKVGDASVV KIIELED
Arabidopsis Description
Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q94KE3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.