Factsheet for Solyc09g008840.2.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

cytosol 4
plastid 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

unclear: 26455813

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc08g081570.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36580.1	Solyc08g081570.2.1	AT1G63970.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006945	Potato	mitochondrion	92.79	98.0
Solyc10g083720.1.1	Tomato	plastid	89.56	89.56
VIT_08s0007g04170.t01	Wine grape	plastid	85.96	88.13
Os11t0148500-02	Rice	plasma membrane	87.48	87.48
KRH67815	Soybean	cytosol, endoplasmic reticulum	87.48	87.48
Os12t0145700-01	Rice	plasma membrane	87.29	87.29
KRH20011	Soybean	nucleus	87.29	87.29
KRH32634	Soybean	endoplasmic reticulum	87.1	87.1
EES09257	Sorghum	cytosol, peroxisome, plastid	86.72	86.72
GSMUA_Achr10P...	Banana	cytosol	86.72	86.72
Bra028545.1-P	Field mustard	cytosol, plastid	86.34	86.34
AT3G52990.1	Thale cress	cytosol, plastid	86.15	86.15
KXG22956	Sorghum	cytosol, peroxisome, plastid	86.15	86.15
TraesCS5A01G131100.1	Wheat	golgi	86.15	86.15
TraesCS5B01G131000.1	Wheat	golgi, unclear	86.15	86.15
Zm00001d023379_P001	Maize	extracellular, plasma membrane	86.15	86.15
CDY13321	Canola	cytosol, plastid	86.15	86.15
CDX76243	Canola	cytosol, plastid	86.15	86.15
CDX73585	Canola	cytosol, plastid	86.15	86.15
CDX67554	Canola	cytosol, plastid	86.15	86.15
Bra019634.1-P	Field mustard	cytosol, plastid	86.15	86.15
GSMUA_Achr11P...	Banana	plastid	83.87	85.99
CDY58286	Canola	cytosol, plastid	85.96	85.96
CDX78139	Canola	cytosol, plastid	85.96	85.96
Bra006965.1-P	Field mustard	cytosol, plastid	85.96	85.96
HORVU5Hr1G041120.7	Barley	cytosol	86.15	85.82
Zm00001d052494_P001	Maize	plasma membrane	85.77	85.77
AT2G36580.1	Thale cress	cytosol, peroxisome, plastid	85.39	85.39
GSMUA_Achr6P13430_001	Banana	cytosol	85.39	85.07
KRG96114	Soybean	cytosol	87.1	84.69
KRH57945	Soybean	cytosol, endoplasmic reticulum	30.17	82.81
GSMUA_Achr2P20210_001	Banana	plastid	84.06	81.14
Solyc11g007690.1.1	Tomato	cytosol, extracellular, nucleus	74.95	80.61
KRH57981	Soybean	cytosol	37.76	65.68
Solyc01g049650.2.1	Tomato	cytosol, mitochondrion, plastid	40.8	42.83
Solyc04g008740.2.1	Tomato	plastid	41.18	42.55
Solyc03g007810.2.1	Tomato	plastid	25.24	23.01
Solyc08g077180.2.1	Tomato	plastid	25.05	22.76
Solyc01g106780.2.1	Tomato	cytosol, plastid	24.67	22.61
Solyc09g082970.2.1	Tomato	plastid	22.96	20.4
TraesCS1D01G104600.1	Wheat	cytosol, extracellular, peroxisome	3.23	11.89
Solyc06g051930.2.1	Tomato	plastid	15.94	11.11

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	Gene3D:3.20.20.60	Gene3D:3.40.1380.20
MapMan:50.2.7	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806
InterPro:IPR036918	UniProt:K4CQR9	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	PANTHER:PTHR11817
PANTHER:PTHR11817:SF38	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf
InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935	EnsemblPlantsGene:Solyc09g008840.2
EnsemblPlants:Solyc09g008840.2.1	TIGRFAMs:TIGR01064	UniParc:UPI000276C0F9	:	:	:

Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:K4CQR9]

Coordinates

chr9:-:2258920..2266051

Molecular Weight (calculated)

57253.3 Da

IEP (calculated)

7.575

GRAVY (calculated)

0.007

Length

527 amino acids

Sequence
(BLAST)

001: MHSNHLLLEE PIRMASILEP SKAGFFPAMT KIVGTLGAKS RSVEVLSACL KAGMSVARFD FSLGDTKYHQ ETLENLKSAI KSTKKLCSVM LDTAGPELTV
101: VNKSEKPISL EANATITLTP DEGQEASSEV FPINFGGLSK AVKKGDTIFI GQYLFTGSET TSVWLEVDQV KGDDIVCIVK NSATLTGSLF TLHAAQIHID
201: LPTLSDKDKK VISTWGVQNK IDFLSLSFTR HAEDVREARE FLSKLGDLSQ TQIFAKIENE EGLKHFDDIL QEADGIILSR GNLGIDLPPE KVFLFQKAAV
301: YKCNMAGKPA VVTRVVDSMT DNLRPTRAEA TDVANAVLDG TDAILLGAET LRGLYPIETI STVGKICAEA EKVFNQDLYF KRTVKFVGEP MSHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVLSVVI PRLKTNQLKW SFTGAFEARQ SLIVRGLFPM LADPRHPAES TNASNESVLK VALDHGKASG
501: VVKSHDRVVI CQKVGDASVV KIIELEG

Best Arabidopsis Sequence Match ( AT3G52990.1 )
(BLAST)

001: MHSSHLLLEE PIRMASILEP SKSSFFPALT KIVGTLGPKS RSVEALSGCL KAGMSVARFD FSWGDADYHQ ETLDNLKVAV RSTKKLCAVM LDTVGPELQV
101: INKSEKAITL KADGLVTLTP NQDQEASSEV LPINFNGLAK AVKKGDTIFV GQYLFTGSET TSVWLEVDEV KGDDVICLSR NAATLAGSLF TLHSSQVHID
201: LPTLTEKDKE VISTWGVQNK IDFLSLSYCR HAEDVRQTRE MLKKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKAAL
301: YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYF KKTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVISVVI PRVKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESVLK VALDHGKHAG
501: VIKSHDRVVV CQKVGDASVV KIIELED

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q94KE3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.