Factsheet for Solyc11g007690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070265	Potato	cytosol	96.33	89.56
KRH71733	Soybean	cytosol	24.69	86.43
VIT_13s0074g00210.t01	Wine grape	cytosol, plastid	85.51	79.51
KRG92070	Soybean	endoplasmic reticulum, nucleus	81.84	76.24
Solyc10g083720.1.1	Tomato	plastid	81.84	76.09
KRH34711	Soybean	endoplasmic reticulum	81.43	75.86
Solyc09g008840.2.1	Tomato	unclear	80.61	74.95
Solyc04g008740.2.1	Tomato	plastid	39.18	37.65
Solyc01g049650.2.1	Tomato	cytosol, mitochondrion, plastid	37.96	37.05
Solyc08g077180.2.1	Tomato	plastid	26.12	22.07
Solyc03g007810.2.1	Tomato	plastid	25.51	21.63
Solyc01g106780.2.1	Tomato	cytosol, plastid	24.29	20.7
Solyc09g082970.2.1	Tomato	plastid	22.86	18.89
Solyc06g051930.2.1	Tomato	plastid	16.73	10.85

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	Gene3D:3.20.20.60	Gene3D:3.40.1380.20
MapMan:50.2.7	ncoils:Coil	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955
InterPro:IPR015806	InterPro:IPR036918	UniProt:K4D530	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050
PANTHER:PTHR11817	PANTHER:PTHR11817:SF38	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_C
InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935
EnsemblPlantsGene:Solyc11g007690.1	EnsemblPlants:Solyc11g007690.1.1	TIGRFAMs:TIGR01064	UniParc:UPI000276A426	:	:

Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:K4D530]

Coordinates

chr11:+:1924222..1933766

Molecular Weight (calculated)

53917.5 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.010

Length

490 amino acids

Sequence
(BLAST)

001: MHSTNLLLEE PIRMASILEP SKPTFFPAMT KIVGTLGPKS RSVEIISSCL ESGMSVARFD FSWGDAEFHQ ETLENLRAAV KKSKKLCAVM LDTGGPELQV
101: VNKSEHPISL QADSLVVLTP DQDKEATPNL LPINFSGLSK SVKKGDTIFI GQYLFTGSET TSVWLEVTEV KGEDVVCLIK NSATLAGPLY TLHVSQIRIE
201: LPTLTDKDKK VISTWAFRNK IDILSLSYTR NAEDVRHARE FLSKLGDLDQ TQIFAKIENV EGMGNFDEIL EEADGIILSR GNLGIDLPPE KVFLFQKAAV
301: HRCNMAGKPA VVTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGKICAEA EKVYNQDVYF KRAVKCVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PPMPVLSVVI PRLKTNQLRW TFSGAFQARQ SLIVRGIFPI LADPRHPLLL SPQMQLMSRY

Best Arabidopsis Sequence Match ( AT3G52990.1 )
(BLAST)

001: MHSSHLLLEE PIRMASILEP SKSSFFPALT KIVGTLGPKS RSVEALSGCL KAGMSVARFD FSWGDADYHQ ETLDNLKVAV RSTKKLCAVM LDTVGPELQV
101: INKSEKAITL KADGLVTLTP NQDQEASSEV LPINFNGLAK AVKKGDTIFV GQYLFTGSET TSVWLEVDEV KGDDVICLSR NAATLAGSLF TLHSSQVHID
201: LPTLTEKDKE VISTWGVQNK IDFLSLSYCR HAEDVRQTRE MLKKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKAAL
301: YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI STVGRICAEA EKVFNQDLYF KKTVKYVGEP MTHLESIASS
401: AVRAAIKVKA SVIICFTSSG RAARLIAKYR PTMPVISVVI PRVKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES TSATNESVLK VALDHGKHAG
501: VIKSHDRVVV CQKVGDASVV KIIELED

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q94KE3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.