Factsheet for Solyc04g008740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
plastid: 26371478
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065094	Potato	cytosol	99.02	99.02
VIT_08s0056g00190.t01	Wine grape	cytosol	91.18	91.18
KRG93166	Soybean	cytosol	90.59	90.59
KRH56500	Soybean	nucleus	90.2	90.02
GSMUA_AchrUn_...	Banana	cytosol	79.8	89.85
GSMUA_Achr2P03840_001	Banana	cytosol	69.22	89.82
GSMUA_Achr3P27180_001	Banana	cytosol	81.57	88.51
CDX81195	Canola	cytosol	40.39	88.41
CDY60039	Canola	cytosol	40.39	88.41
GSMUA_Achr9P23750_001	Banana	cytosol	86.67	88.05
EES13103	Sorghum	cytosol	87.06	86.55
Os04t0677500-01	Rice	cytosol	86.47	86.3
CDY21551	Canola	cytosol	86.27	86.27
CDX69938	Canola	cytosol	86.27	86.27
Bra009352.1-P	Field mustard	cytosol	86.27	86.27
Zm00001d001831_P001	Maize	cytosol	86.67	86.16
AT5G08570.3	Thale cress	cytosol	86.08	86.08
CDX81114	Canola	cytosol	83.14	86.0
CDY39852	Canola	cytosol	82.94	85.8
CDY41529	Canola	cytosol	82.94	85.8
CDX84432	Canola	cytosol	82.94	85.8
Bra037750.1-P	Field mustard	cytosol	85.69	85.69
CDX78344	Canola	cytosol	82.55	85.4
AT5G63680.2	Thale cress	cytosol	85.29	85.29
Bra006008.1-P	Field mustard	cytosol	85.29	85.29
Bra038654.1-P	Field mustard	cytosol	85.29	85.29
GSMUA_Achr8P13860_001	Banana	mitochondrion	84.71	84.87
TraesCS2A01G593000.1	Wheat	cytosol	84.71	84.05
TraesCS2D01G561700.1	Wheat	cytosol, golgi	84.31	83.66
TraesCS2B01G591300.1	Wheat	cytosol	84.31	83.66
HORVU2Hr1G040570.1	Barley	mitochondrion	72.35	83.11
CDY60038	Canola	cytosol	35.69	82.35
CDX81194	Canola	cytosol	34.12	80.93
Solyc01g049650.2.1	Tomato	cytosol, mitochondrion, plastid	75.69	76.89
Zm00001d026619_P001	Maize	mitochondrion	87.06	72.91
HORVU2Hr1G119460.2	Barley	cytosol, mitochondrion	51.76	59.33
Solyc09g008840.2.1	Tomato	unclear	42.55	41.18
Solyc10g083720.1.1	Tomato	plastid	42.16	40.8
Solyc11g007690.1.1	Tomato	cytosol, extracellular, nucleus	37.65	39.18
Solyc03g007810.2.1	Tomato	plastid	35.69	31.49
Solyc08g077180.2.1	Tomato	plastid	34.71	30.52
Solyc01g106780.2.1	Tomato	cytosol, plastid	29.61	26.26
Solyc09g082970.2.1	Tomato	plastid	27.65	23.78
Solyc06g051930.2.1	Tomato	plastid	20.39	13.76

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	MapMan:2.1.1.8	Gene3D:2.40.33.10	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806
InterPro:IPR036918	UniProt:K4BP30	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	ScanProsite:PS00110
PANTHER:PTHR11817	PANTHER:PTHR11817:SF5	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS
InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621
SUPFAM:SSF52935	EnsemblPlantsGene:Solyc04g008740.2	EnsemblPlants:Solyc04g008740.2.1	TIGRFAMs:TIGR01064	UniParc:UPI000276731C	:

Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:K4BP30]

Coordinates

chr4:-:2398964..2404186

Molecular Weight (calculated)

55227.7 Da

IEP (calculated)

7.595

GRAVY (calculated)

0.026

Length

510 amino acids

Sequence
(BLAST)

001: MANIDIAGIM KDLPNDGRIP KTKIVCTLGP SSRTVPMLEK LLRAGMNVAR FNFSHGTHEY HQETLNNLKI AMQNTQILCA VMLDTKGPEI RTGFLTDGKP
101: IQLKEGQEIT VSTDYTIKGN EEMISMSYKK LVVDLKPGNT ILCADGTITL TVLSCDPPSG TVRCRCENTA TLGERKNVNL PGVVVDLPTL TEKDKEDILE
201: WGVPNNIDMI ALSFVRKGSD LVNVRKVLGP HAKRIQLMSK VENQEGVINF DEILRETDSF MVARGDLGME IPVEKIFLAQ KMMIYKCNLA GKAVVTATQM
301: LESMIKSPRP TRAEATDVAN AVLDGTDCVM LSGESAAGAY PELAVKIMSR ICIEAESSLD NEAIFKEMIR CTPLPMSPLE SLASSAVRTA NKARAKLIVV
401: LTRGGSTAKL VAKYRPAVPI LSVVVPVLTT DSFDWSISDE TPARHSLVYR GLIPLLGEGS AKATDSESTE VILEASLKSA VTKGLCKPGD AVVALHRIGS
501: ASVIKICIVK

Best Arabidopsis Sequence Match ( AT5G08570.1 )
(BLAST)

001: MSNIDIEGIL KELPNDGRIP KTKIVCTLGP ASRTVSMIEK LLKAGMNVAR FNFSHGSHEY HQETLDNLRS AMHNTGILAA VMLDTKGPEI RTGFLKDGNP
101: IQLKEGQEIT ITTDYDIQGD ESTISMSYKK LPLDVKPGNT ILCADGSISL AVLSCDPESG TVRCRCENSA MLGERKNVNL PGVVVDLPTL TDKDIEDILG
201: WGVPNSIDMI ALSFVRKGSD LVNVRKVLGS HAKSIMLMSK VENQEGVINF DEILRETDAF MVARGDLGME IPIEKIFLAQ KLMIYKCNLA GKPVVTATQM
301: LESMIKSPRP TRAEATDVAN AVLDGTDCVM LSGESAAGAY PEIAVKVMAK ICIEAESSLD YNTIFKEMIR ATPLPMSPLE SLASSAVRTA NKARAKLIIV
401: LTRGGSTANL VAKYRPAVPI LSVVVPVMTT DSFDWSCSDE SPARHSLIYR GLIPMLAEGS AKATDSEATE VIIEAALKSA TQRGLCNRGD AIVALHRIGA
501: ASVIKICVVK

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UBM6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.