Factsheet for Solyc08g077180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20363867
plastid: 22908117
unclear: 26455813

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062238	Potato	plastid	97.59	97.59
TraesCS1A01G213000.1	Wheat	cytosol	62.93	78.49
GSMUA_Achr8P14820_001	Banana	mitochondrion	65.17	77.46
VIT_02s0012g01170.t01	Wine grape	plastid	74.48	75.52
GSMUA_Achr4P28890_001	Banana	cytosol	62.41	74.49
KRH77227	Soybean	plastid	69.14	73.58
Zm00001d030020_P001	Maize	plastid	69.14	70.6
Os10t0571200-01	Rice	plastid	69.31	70.53
EER94457	Sorghum	plastid	68.79	70.25
AT1G32440.1	Thale cress	plastid	69.14	70.23
CDY32285	Canola	plastid	68.97	70.05
Zm00001d047054_P001	Maize	plastid	67.59	69.88
CDY48872	Canola	plastid	68.62	69.7
Bra010164.1-P	Field mustard	plastid	68.45	69.53
TraesCS1D01G215900.1	Wheat	golgi	67.59	69.38
TraesCS1B01G226500.1	Wheat	plastid	67.24	69.15
KRH28271	Soybean	cytosol	30.86	68.85
GSMUA_Achr4P21740_001	Banana	plastid	64.83	66.31
HORVU1Hr1G054380.3	Barley	mitochondrion	66.55	65.65
Solyc03g007810.2.1	Tomato	plastid	65.34	65.57
GSMUA_AchrUn_...	Banana	cytosol	23.62	63.13
Solyc09g082970.2.1	Tomato	plastid	36.03	35.24
Solyc01g049650.2.1	Tomato	cytosol, mitochondrion, plastid	30.34	35.06
Solyc04g008740.2.1	Tomato	plastid	30.52	34.71
Solyc01g106780.2.1	Tomato	cytosol, plastid	33.28	33.57
Solyc11g007690.1.1	Tomato	cytosol, extracellular, nucleus	22.07	26.12
Solyc10g083720.1.1	Tomato	plastid	23.1	25.43
Solyc09g008840.2.1	Tomato	unclear	22.76	25.05
Solyc06g051930.2.1	Tomato	plastid	16.21	12.43

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	MapMan:3.12.8	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	MapMan:5.1.2.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806	InterPro:IPR036918	UniProt:K4CN78
PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	ScanProsite:PS00110	PANTHER:PTHR11817	PANTHER:PTHR11817:SF26
InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf
InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935	EnsemblPlantsGene:Solyc08g077180.2
EnsemblPlants:Solyc08g077180.2.1	TIGRFAMs:TIGR01064	UniParc:UPI000276C29F	SEG:seg	:	:

Description

Plastidial pyruvate kinase 3, chloroplastic [Source:Projected from Arabidopsis thaliana (AT1G32440) UniProtKB/Swiss-Prot;Acc:Q93Z53]

Coordinates

chr8:-:61088085..61095125

Molecular Weight (calculated)

63667.0 Da

IEP (calculated)

7.169

GRAVY (calculated)

-0.225

Length

580 amino acids

Sequence
(BLAST)

001: MAALNLHTGG LHAALKSDVA VKSAASLDRL SSAKNIGDLF FSDLSFHRKR VNGLCQIVAV KSPDHIRGAN NNVHASYDDD DNSNFNLPLT SSSSPYSLGK
101: ESVYLNSPRK TKIVCTIGPS TSSKEMIWKL AEAGMNVARM NMSHGDHASH QKTIDLVKEY NAQFENKVIA IMLDTKGPEV RSGDVPKPIL LKEGQEFNFT
201: IKRGVSTEDT VSVNYDDFIN DVDSGDTLLV DGGMMSLVVK SKTSDVVKCE VIDGGELKSR RHLNVRGKSA TLPSITEKDW DDIKFGVDNQ VDFYAVSFVK
301: DAKVVHELKD YLKSCNADIH VIVKIESADS IPNLHSILTA SDGAMVARGD LGAELPIEEV PLLQEDIIRR CRSMQKPVIV ATNMLESMID HPTPTRAEVS
401: DISIAVREGA DAIMLSGETA HGKYPLKAVH VMHVVALRTE SSLQNSTTSP SQSVAHKGHM GEMFAFHSST MADTLSTPII VFTRTGSMAI ILSHKRPSST
501: IFAFTNNERV KQRLALFHGV VPIYMEFSED AEETFSRAIK LLVNKSSVKD GQYVTLVQSG AQPIWRRHST HHIQVRKVQS

Best Arabidopsis Sequence Match ( AT1G32440.1 )
(BLAST)

001: MAAYGQISSG MTVDPQVLSS SRNIGVSLSP LRRTLIGAGV RSTSISLRQC SLSVRSIKIS EDSRKPKAYA ENGAFDVGVL DSSSYRLADS RTSSNDSRRK
101: TKIVCTIGPS SSSREMIWKL AEAGMNVARL NMSHGDHASH QITIDLVKEY NSLFVDKAIA IMLDTKGPEV RSGDVPQPIF LEEGQEFNFT IKRGVSLKDT
201: VSVNYDDFVN DVEVGDILLV DGGMMSLAVK SKTSDLVKCV VIDGGELQSR RHLNVRGKSA TLPSITDKDW EDIKFGVDNQ VDFYAVSFVK DAKVVHELKN
301: YLKTCSADIS VIVKIESADS IKNLPSIISA CDGAMVARGD LGAELPIEEV PLLQEEIIRR CRSIHKPVIV ATNMLESMIN HPTPTRAEVS DIAIAVREGA
401: DAIMLSGETA HGKFPLKAVN VMHTVALRTE ASLPVRTSAS RTTAYKGHMG QMFAFHASIM ANTLSSPLIV FTRTGSMAVL LSHYRPSATI FAFTNQRRIM
501: QRLALYQGVM PIYMEFSDDA EDTYARSLKL LQDENMLKEG QHVTLVQSGS QPIWREESTH LIQVRKIKIG G

Arabidopsis Description

PKP3Plastidial pyruvate kinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.