Factsheet for TraesCS1D01G215900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G226500.1	Wheat	plastid	98.94	99.11
TraesCS1A01G213000.1	Wheat	cytosol	81.42	98.92
HORVU1Hr1G054380.3	Barley	mitochondrion	93.27	89.63
Os10t0571200-01	Rice	plastid	86.55	85.79
Zm00001d030020_P001	Maize	plastid	84.25	83.8
EER94457	Sorghum	plastid	83.89	83.45
Zm00001d047054_P001	Maize	plastid	82.12	82.71
GSMUA_Achr8P14820_001	Banana	mitochondrion	67.61	78.28
GSMUA_Achr4P28890_001	Banana	cytosol	65.66	76.34
VIT_02s0012g01170.t01	Wine grape	plastid	70.8	69.93
KRH77227	Soybean	plastid	66.55	68.99
GSMUA_Achr4P21740_001	Banana	plastid	68.32	68.08
Solyc08g077180.2.1	Tomato	plastid	69.38	67.59
AT1G32440.1	Thale cress	plastid	67.96	67.25
CDY48872	Canola	plastid	67.79	67.08
CDY32285	Canola	plastid	67.79	67.08
PGSC0003DMT400062238	Potato	plastid	68.85	67.07
Bra010164.1-P	Field mustard	plastid	67.61	66.9
GSMUA_AchrUn_...	Banana	cytosol	25.66	66.82
KRH28271	Soybean	cytosol	29.91	65.0
TraesCS3D01G239500.1	Wheat	plastid	66.37	64.99
TraesCS2D01G237900.1	Wheat	plastid	39.29	38.95
TraesCS4D01G018900.1	Wheat	plastid	33.63	35.25
TraesCS2D01G561700.1	Wheat	cytosol, golgi	31.15	34.24
TraesCS4D01G176600.1	Wheat	cytosol	29.91	33.2
TraesCS3D01G192800.1	Wheat	cytosol	29.91	32.94
TraesCS4D01G104100.1	Wheat	cytoskeleton, cytosol, peroxisome	23.36	24.26
TraesCS5D01G138800.1	Wheat	cytosol	21.77	23.34
TraesCS1D01G104600.1	Wheat	cytosol, extracellular, peroxisome	1.95	7.69

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	MapMan:3.12.8	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	MapMan:5.1.2.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016740
GO:GO:0030955	InterPro:IPR015806	InterPro:IPR036918	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050
ScanProsite:PS00110	PANTHER:PTHR11817	PANTHER:PTHR11817:SF26	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf
InterPro:Pyrv_Knase_AS	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800
SUPFAM:SSF51621	SUPFAM:SSF52935	TIGRFAMs:TIGR01064	EnsemblPlantsGene:TraesCS1D01G215900	EnsemblPlants:TraesCS1D01G215900.1	SEG:seg

Description

No Description!

Coordinates

chr1D:-:301629378..301634121

Molecular Weight (calculated)

61254.4 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.125

Length

565 amino acids

Sequence
(BLAST)

001: MAAAAAEMVR GFAATARAAR PAATVAAPPQ PRRAVAARVL RTSASEKVAA DLSVAGTNGS LSALSNTDVS TDATSQAVDA TPRRKTKIVC TIGPSTNTRE
101: MIWKLAETGM NVARMNMSHG DHQSHQKVID LVKEYNAQNT DGNTVAIMLD TKGPEVRSGD LPEPIMLAEG QEFNFTIKRG VSTEDTVSVN YDDFISDVEA
201: GDILLVDGGM MSLAVKSKTA DTVKCVVVDG GELKSRRHLN VRGKSATLPS ITEKDWEDIK FGVENGVDFY AVSFVKDAKV IHELKAYLKS ANADIHVIPK
301: IESADSIPNL QSIIAASDGA MVARGDLGAE LPIEEVPLLQ EEIIRTCRSM QKPVIVATNM LESMIDHPTP TRAEVSDIAI AVREAADAIM LSGETAHGKY
401: PLKAVKVMHT VALRTESSLY DPTKAPSLVA RPKALLNDDF CKSQLSKMFG SHATMMANTL RTPIIVFTRV GSMAVLLSHY RPSSTIYAFT NEVRVKQRLA
501: LYQGVVPILM EFSDDAEETF SRAITSLLDA KYMNEGDYVT LVQSGSQSIW REESTHHIQV RKVQC

Best Arabidopsis Sequence Match ( AT1G32440.1 )
(BLAST)

001: MAAYGQISSG MTVDPQVLSS SRNIGVSLSP LRRTLIGAGV RSTSISLRQC SLSVRSIKIS EDSRKPKAYA ENGAFDVGVL DSSSYRLADS RTSSNDSRRK
101: TKIVCTIGPS SSSREMIWKL AEAGMNVARL NMSHGDHASH QITIDLVKEY NSLFVDKAIA IMLDTKGPEV RSGDVPQPIF LEEGQEFNFT IKRGVSLKDT
201: VSVNYDDFVN DVEVGDILLV DGGMMSLAVK SKTSDLVKCV VIDGGELQSR RHLNVRGKSA TLPSITDKDW EDIKFGVDNQ VDFYAVSFVK DAKVVHELKN
301: YLKTCSADIS VIVKIESADS IKNLPSIISA CDGAMVARGD LGAELPIEEV PLLQEEIIRR CRSIHKPVIV ATNMLESMIN HPTPTRAEVS DIAIAVREGA
401: DAIMLSGETA HGKFPLKAVN VMHTVALRTE ASLPVRTSAS RTTAYKGHMG QMFAFHASIM ANTLSSPLIV FTRTGSMAVL LSHYRPSATI FAFTNQRRIM
501: QRLALYQGVM PIYMEFSDDA EDTYARSLKL LQDENMLKEG QHVTLVQSGS QPIWREESTH LIQVRKIKIG G

Arabidopsis Description

PKP3Plastidial pyruvate kinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.