Factsheet for TraesCS3D01G192800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G241900.1
TraesCS1B01G253500.1
TraesCS1D01G104600.1
TraesCS1D01G241800.2
TraesCS5A01G131100.1
TraesCS5B01G131000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56350.1	TraesCS1D01G104600.1	AT2G36580.1	21798944
AT5G56350.1	TraesCS5A01G131100.1	AT2G36580.1	21798944
AT5G56350.1	TraesCS5B01G131000.1	AT2G36580.1	21798944
AT5G56350.1	TraesCS1A01G241900.1	AT4G33030.1	21798944
AT5G56350.1	TraesCS1B01G253500.1	AT4G33030.1	21798944
AT5G56350.1	TraesCS1D01G241800.2	AT4G33030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G189300.1	Wheat	cytosol	100.0	100.0
HORVU3Hr1G039230.1	Barley	cytosol, plastid	98.44	98.44
TraesCS3B01G218500.1	Wheat	mitochondrion	95.52	93.69
HORVU3Hr1G039200.3	Barley	cytosol	80.12	90.93
Os01t0276700-02	Rice	cytosol	90.06	90.59
EES02767	Sorghum	cytosol	89.86	90.57
Zm00001d040446_P001	Maize	extracellular, plasma membrane	88.69	89.39
GSMUA_Achr10P...	Banana	mitochondrion	74.27	84.48
GSMUA_Achr5P27680_001	Banana	plasma membrane	81.09	83.03
AT5G56350.1	Thale cress	cytosol, mitochondrion, plastid	79.14	81.53
PGSC0003DMT400028308	Potato	plastid	79.34	81.08
KRH50504	Soybean	mitochondrion	79.14	81.04
VIT_08s0007g07600.t01	Wine grape	cytosol, mitochondrion, plastid	78.95	81.0
Solyc01g049650.2.1	Tomato	cytosol, mitochondrion, plastid	79.14	80.88
KRG89466	Soybean	endoplasmic reticulum, nucleus	79.14	80.88
CDY11933	Canola	cytosol, mitochondrion, plastid	68.23	80.65
TraesCS4D01G176600.1	Wheat	cytosol	79.53	80.16
CDY46578	Canola	cytosol	65.5	79.81
CDY32790	Canola	cytosol	65.5	79.81
VIT_06s0004g00130.t01	Wine grape	cytosol	78.56	79.64
Bra028934.1-P	Field mustard	cytosol, mitochondrion, plastid	72.51	79.15
Bra002822.1-P	Field mustard	cytosol	76.8	79.12
Bra009818.1-P	Field mustard	mitochondrion	35.09	78.6
AT4G26390.1	Thale cress	mitochondrion	75.63	78.07
GSMUA_Achr6P36810_001	Banana	mitochondrion	14.43	77.89
CDY36795	Canola	endoplasmic reticulum	58.48	76.14
KRH70138	Soybean	cytosol	14.23	75.26
TraesCS2D01G561700.1	Wheat	cytosol, golgi	74.66	74.51
KRH08482	Soybean	cytosol	73.49	73.35
CDY45309	Canola	plastid	44.25	72.99
AT3G25960.1	Thale cress	mitochondrion	68.42	70.62
GSMUA_Achr6P16340_001	Banana	cytosol	31.77	69.96
Bra001095.1-P	Field mustard	cytosol	67.06	69.92
KRH70137	Soybean	cytosol, endoplasmic reticulum	55.56	69.34
AT3G04050.1	Thale cress	cytosol, mitochondrion, plastid	68.81	69.22
CDX74201	Canola	cytosol	63.94	69.2
CDX92057	Canola	cytosol	63.94	69.2
CDY66490	Canola	cytosol	66.08	68.9
Bra036411.1-P	Field mustard	cytosol	65.89	68.7
CDY27175	Canola	cytosol, mitochondrion	60.43	68.58
Bra007286.1-P	Field mustard	cytosol, mitochondrion	60.43	68.58
CDY66977	Canola	cytosol	65.5	68.29
AT3G55650.1	Thale cress	mitochondrion	67.64	68.04
CDY50878	Canola	cytosol	64.72	67.76
AT3G55810.1	Thale cress	mitochondrion	64.72	67.48
Bra031951.1-P	Field mustard	cytosol	64.33	67.35
CDY42900	Canola	cytosol	61.79	67.16
CDY42677	Canola	cytosol	13.65	63.64
CDY04408	Canola	cytosol	10.72	59.14
CDY47408	Canola	cytosol	10.53	58.06
CDY26450	Canola	cytosol	10.33	56.99
CDX72091	Canola	mitochondrion, plastid	49.32	54.88
CDY42678	Canola	cytosol	8.58	49.44
CDY00607	Canola	cytosol	35.28	46.89
TraesCS5D01G138800.1	Wheat	cytosol	40.16	39.09
TraesCS4D01G104100.1	Wheat	cytoskeleton, cytosol, peroxisome	38.79	36.58
CDY42679	Canola	mitochondrion	7.8	34.78
TraesCS1D01G215900.1	Wheat	golgi	32.94	29.91
TraesCS3D01G239500.1	Wheat	plastid	32.16	28.6
TraesCS4D01G018900.1	Wheat	plastid	26.71	25.42
TraesCS2D01G237900.1	Wheat	plastid	27.88	25.09
TraesCS1D01G104600.1	Wheat	cytosol, extracellular, peroxisome	2.73	9.79

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	MapMan:2.1.1.8	Gene3D:2.40.33.10	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806
InterPro:IPR036918	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050	ScanProsite:PS00110	PANTHER:PTHR11817
PANTHER:PTHR11817:SF5	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS	InterPro:Pyrv_Knase_C
InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621	SUPFAM:SSF52935
TIGRFAMs:TIGR01064	EnsemblPlantsGene:TraesCS3D01G192800	EnsemblPlants:TraesCS3D01G192800.1	TIGR:cd00288	SEG:seg	:

Description

No Description!

Coordinates

chr3D:-:182596166..182600668

Molecular Weight (calculated)

55540.1 Da

IEP (calculated)

7.322

GRAVY (calculated)

0.058

Length

513 amino acids

Sequence
(BLAST)

001: MVSNGELSQP QAGEYGLAVM RRRPKTKIVC TLGPASRSVD MIEKLLRAGM CVARFNFSHG SHDYHQETLD NLHAAMERTG ILCAVMLDTK GPEIRTGFLK
101: DGKPIQLRKG QEIVISTDYS IKGDDKMISM SYKKLAVDLK PGSVILCADG TITLTVLHCD KEQGLVRCCC ENTAMLGERK NVNLPGVVVD LPTLTEKDKE
201: DILQWGVPNK IDMIALSFVR KGSDLVEVRK VLGEHAKSIM LMSKVENQEG VANFDDILAQ SDAFMVARGD LGMEIPVEKI FYAQKVMIFK CNIQGKPVVT
301: ATQMLESMIK SPRPTRAEAT DVANAVLDGT DCVMLSGETA AGAYPELAVQ TMAKICLQAE SCVDYSAVFK SIMSSAPIPM SPLESLASSA VRTANSAKAT
401: LILVLTRGGT TARLVAKYRP SMPILSVVVP ELKTVEFDWI CSDEGPARQS LIVRGVIPML SAGTAKAFDS EATEEALRFA MKNAKEMGLC NAGESIVALH
501: RIGNASVIKL LTV

Best Arabidopsis Sequence Match ( AT5G56350.1 )
(BLAST)

001: MAMIEQRPKT KIVCTLGPAS RSVPMVEKLL RAGMNVARFN FSHGSHEYHQ ETLDNLHQAM LNTGILCAVM LDTKGPEIRT GFLKDGKPIQ LKQGQEITIS
101: TDYDLKGDEN TICMSYKKLA VDVNPGMVIL CADGTISLLV LSCDKENGTV RCRCENSAML GERKNVNLPG VVVDLPTLTE KDKEDIMQWG VPNQIDMIAL
201: SFVRKGSDLV QVRKLLGKHA KNILLMSKVE NQEGVANFDD ILVNSDAFMI ARGDLGMEIP IEKIFLAQKV MIYKCNIQGK PVVTATQMLE SMIKSPRPTR
301: AEATDVANAV LDGTDCVMLS GETAAGAYPE LAVRTMAKIC VEAESTLDYG DVFKRIMLYS PVPMSPLESL ASSAVRTANS ARATLIMVLT RGGSTARLVA
401: KYRPGMPILS VVVPEIKTDF FDWSCSDESP ARHSLIFRGL IPVLYAGSAR ASHDESTEEA IEFATQYGKE KELCKTGDSV VALLRVGNAS VIKILTVK

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q9FM97]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.