Factsheet for VIT_06s0004g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_04s0008g01190.t01
VIT_08s0007g04170.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56350.1	VIT_08s0007g04170.t01	AT2G36580.1	21798944
AT5G56350.1	VIT_04s0008g01190.t01	AT4G33030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50504	Soybean	mitochondrion	89.72	90.62
KRG89466	Soybean	endoplasmic reticulum, nucleus	89.33	90.04
PGSC0003DMT400028308	Potato	plastid	88.54	89.24
Solyc01g049650.2.1	Tomato	cytosol, mitochondrion, plastid	88.14	88.84
AT5G56350.1	Thale cress	cytosol, mitochondrion, plastid	85.77	87.15
Bra028934.1-P	Field mustard	cytosol, mitochondrion, plastid	79.64	85.74
CDY11933	Canola	cytosol, mitochondrion, plastid	73.52	85.71
Bra002822.1-P	Field mustard	cytosol	83.99	85.34
CDY32790	Canola	cytosol	70.55	84.8
CDY46578	Canola	cytosol	70.55	84.8
Bra009818.1-P	Field mustard	mitochondrion	38.34	84.72
AT4G26390.1	Thale cress	mitochondrion	82.21	83.7
VIT_08s0007g07600.t01	Wine grape	cytosol, mitochondrion, plastid	82.61	83.6
CDY36795	Canola	endoplasmic reticulum	63.64	81.73
Os01t0276700-02	Rice	cytosol	81.82	81.18
EES02767	Sorghum	cytosol	81.42	80.94
Zm00001d040446_P001	Maize	extracellular, plasma membrane	80.63	80.16
HORVU3Hr1G039230.1	Barley	cytosol, plastid	79.84	78.75
TraesCS3A01G189300.1	Wheat	cytosol	79.64	78.56
TraesCS3D01G192800.1	Wheat	cytosol	79.64	78.56
TraesCS4B01G174700.1	Wheat	cytosol	77.67	77.21
CDY45309	Canola	plastid	47.43	77.17
TraesCS3B01G218500.1	Wheat	mitochondrion	79.64	77.06
TraesCS4A01G129900.1	Wheat	cytosol	77.27	76.82
TraesCS4D01G176600.1	Wheat	cytosol	77.27	76.82
VIT_08s0056g00190.t01	Wine grape	cytosol	76.88	76.27
VIT_10s0071g01060.t01	Wine grape	cytosol	76.48	75.88
EER92334	Sorghum	cytosol	77.67	75.87
HORVU3Hr1G039200.3	Barley	cytosol	66.8	74.78
Os03t0325000-00	Rice	cytosol	61.07	71.53
VIT_08s0007g04170.t01	Wine grape	plastid	42.09	41.44
VIT_08s0007g05490.t01	Wine grape	cytosol	39.13	40.16
VIT_13s0074g00210.t01	Wine grape	cytosol, plastid	41.7	40.04
VIT_08s0007g05430.t01	Wine grape	endoplasmic reticulum, extracellular	10.47	30.29
VIT_02s0012g01170.t01	Wine grape	plastid	33.99	30.07
VIT_16s0050g02180.t01	Wine grape	plastid	33.99	29.86
VIT_05s0020g04480.t01	Wine grape	plastid	30.43	26.28
VIT_00s0179g00350.t01	Wine grape	plastid	28.85	25.66
VIT_03s0088g00410.t01	Wine grape	plastid	27.08	23.91
VIT_16s0050g02660.t01	Wine grape	plastid	19.57	13.06

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	EntrezGene:100255318	wikigene:100255318	MapMan:2.1.1.8
Gene3D:2.40.33.10	Gene3D:3.20.20.60	Gene3D:3.40.1380.20	ProteinID:CCB43821	ProteinID:CCB43821.1	UniProt:F6GUP4
EMBL:FN594951	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030955	InterPro:IPR015806
InterPro:IPR036918	EntrezGene:LOC100255318	wikigene:LOC100255318	PFAM:PF00224	PFAM:PF02887	PRINTS:PR01050
ScanProsite:PS00110	PANTHER:PTHR11817	PANTHER:PTHR11817:SF5	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf
InterPro:Pyrv_Knase_AS	InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800
SUPFAM:SSF51621	SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniParc:UPI0002109795	ArrayExpress:VIT_06s0004g00130	EnsemblPlantsGene:VIT_06s0004g00130
EnsemblPlants:VIT_06s0004g00130.t01	RefSeq:XP_002285763	RefSeq:XP_002285763.2	RefSeq:XP_019076257.1	:	:

Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:F6GUP4]

Coordinates

chr6:-:260296..263439

Molecular Weight (calculated)

54954.4 Da

IEP (calculated)

8.316

GRAVY (calculated)

0.018

Length

506 amino acids

Sequence
(BLAST)

001: MAMEKKTVVV DVEKRPKTKI VCTLGPACRS VPMLEKLLRA GMNVARFNFS HGSHEYHLET LSNLRAAMDS TGILCAVMLD TKGPEIRTGF LKDEKPIHLK
101: QGQEITISTD YNIKGDEKMI CMSYKKLAED VKPDSVILCA DGTITFTVLS CDKQKGLVCC RCENSAVLGE RKNVNLPGVI VDLPTLTEKD KEDILNWGVP
201: NKIDMIALSF VRKGSDLVEV RKLLGKHAKN ILLMSKVENQ EGVANFDEIL ANSDAFMVAR GDLGMEIPIE KIFLAQKVMV YKCNIQGKPV VTATQMLESM
301: IKSPRPTRAE ATDVANAVLD GTDCVMLSGE TAAGAYPELA VRTMAKICIE AESTLDYGDV FKRIMKNAPV PMSPLESLAA SAVRTANSAR AALILVLTRG
401: GSTAKLVAKY RPGMPILSVV VPEIKTDSFD WSCSDEAPAR HSLIFRGLVP VLSAASARAS HAETTEEALE FAIQHAKAKG FCKKGDSLVA LHRVGSASVI
501: KILTVK

Best Arabidopsis Sequence Match ( AT5G56350.1 )
(BLAST)

001: MAMIEQRPKT KIVCTLGPAS RSVPMVEKLL RAGMNVARFN FSHGSHEYHQ ETLDNLHQAM LNTGILCAVM LDTKGPEIRT GFLKDGKPIQ LKQGQEITIS
101: TDYDLKGDEN TICMSYKKLA VDVNPGMVIL CADGTISLLV LSCDKENGTV RCRCENSAML GERKNVNLPG VVVDLPTLTE KDKEDIMQWG VPNQIDMIAL
201: SFVRKGSDLV QVRKLLGKHA KNILLMSKVE NQEGVANFDD ILVNSDAFMI ARGDLGMEIP IEKIFLAQKV MIYKCNIQGK PVVTATQMLE SMIKSPRPTR
301: AEATDVANAV LDGTDCVMLS GETAAGAYPE LAVRTMAKIC VEAESTLDYG DVFKRIMLYS PVPMSPLESL ASSAVRTANS ARATLIMVLT RGGSTARLVA
401: KYRPGMPILS VVVPEIKTDF FDWSCSDESP ARHSLIFRGL IPVLYAGSAR ASHDESTEEA IEFATQYGKE KELCKTGDSV VALLRVGNAS VIKILTVK

Arabidopsis Description

Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:Q9FM97]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.