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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • plastid 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68933
CDX72385
CDX75318
CDY13514

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G56350.1 CDX68933 AT4G33030.1 21798944
AT5G56350.1 CDX72385 AT4G33030.1 21798944
AT5G56350.1 CDX75318 AT4G33030.1 21798944
AT5G56350.1 CDY13514 AT4G33030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009818.1-P Field mustard mitochondrion 69.45 94.32
CDY36795 Canola endoplasmic reticulum 86.82 68.53
CDY32790 Canola cytosol 77.49 57.24
CDY46578 Canola cytosol 77.49 57.24
CDY11933 Canola cytosol, mitochondrion, plastid 78.46 56.22
AT5G56350.1 Thale cress cytosol, mitochondrion, plastid 84.57 52.81
CDY60039 Canola cytosol 37.94 50.64
CDX81195 Canola cytosol 37.94 50.64
CDY42678 Canola cytosol 14.47 50.56
AT4G26390.1 Thale cress mitochondrion 77.81 48.69
HORVU3Hr1G039200.3 Barley cytosol 70.42 48.45
PGSC0003DMT400028308 Potato plastid 77.81 48.21
Solyc01g049650.2.1 Tomato cytosol, mitochondrion, plastid 77.49 48.01
VIT_06s0004g00130.t01 Wine grape cytosol 77.17 47.43
KRH50504 Soybean mitochondrion 75.88 47.11
KRG89466 Soybean endoplasmic reticulum, nucleus 75.56 46.81
Os03t0325000-00 Rice cytosol 63.67 45.83
EES02767 Sorghum cytosol 73.95 45.19
Os01t0276700-02 Rice cytosol 73.95 45.1
Zm00001d040446_P001 Maize extracellular, plasma membrane 73.63 44.99
CDY21551 Canola cytosol 72.67 44.31
CDX69938 Canola cytosol 72.67 44.31
TraesCS3D01G192800.1 Wheat cytosol 72.99 44.25
TraesCS3A01G189300.1 Wheat cytosol 72.99 44.25
TraesCS4B01G174700.1 Wheat cytosol 72.35 44.2
TraesCS4A01G129900.1 Wheat cytosol 72.35 44.2
HORVU3Hr1G039230.1 Barley cytosol, plastid 72.67 44.05
TraesCS4D01G176600.1 Wheat cytosol 71.7 43.81
CDX81114 Canola cytosol 69.13 43.61
CDY39852 Canola cytosol 68.81 43.41
CDY41529 Canola cytosol 68.81 43.41
CDX84432 Canola cytosol 68.81 43.41
CDX78344 Canola cytosol 68.81 43.41
TraesCS3B01G218500.1 Wheat mitochondrion 72.67 43.21
EER92334 Sorghum cytosol 71.38 42.86
CDY27175 Canola cytosol, mitochondrion 59.49 40.93
CDX92057 Canola cytosol 62.38 40.93
CDX74201 Canola cytosol 62.38 40.93
CDY42900 Canola cytosol 62.06 40.89
CDY66490 Canola cytosol 63.67 40.24
CDY66977 Canola cytosol 63.34 40.04
CDY50878 Canola cytosol 62.7 39.8
CDX81194 Canola cytosol 21.22 30.7
CDY60038 Canola cytosol 21.22 29.86
CDX72091 Canola mitochondrion, plastid 44.05 29.72
CDY00607 Canola cytosol 33.76 27.2
CDX67554 Canola cytosol, plastid 40.51 23.91
CDY58286 Canola cytosol, plastid 40.51 23.91
CDY13321 Canola cytosol, plastid 40.51 23.91
CDX78139 Canola cytosol, plastid 40.19 23.72
CDX76243 Canola cytosol, plastid 40.19 23.72
CDX73585 Canola cytosol, plastid 40.19 23.72
CDY42679 Canola mitochondrion 7.72 20.87
CDY42677 Canola cytosol 6.43 18.18
CDY48872 Canola plastid 32.8 17.86
CDY32285 Canola plastid 32.8 17.86
CDY66652 Canola plastid 32.8 17.59
CDY60911 Canola plastid 32.8 17.59
CDY19645 Canola plastid 32.8 17.56
CDY35484 Canola plastid 29.9 16.12
CDX92969 Canola plastid 29.58 16.0
CDY40829 Canola plastid 29.58 15.94
CDX94878 Canola plastid 29.58 15.83
CDY69935 Canola cytosol 19.29 12.45
CDY26450 Canola cytosol 2.89 9.68
CDY47408 Canola cytosol 2.89 9.68
CDY04408 Canola cytosol 2.89 9.68
CDX68515 Canola mitochondrion 19.94 8.95
CDY01123 Canola cytosol 0.96 6.82
CDX83068 Canola plastid 2.89 1.24
Protein Annotations
KEGG:00010+2.7.1.40KEGG:00230+2.7.1.40KEGG:00620+2.7.1.40Gene3D:2.40.33.10Gene3D:3.20.20.60Gene3D:3.40.1380.20
MapMan:50.2.7GO:A0A078I7C0UniProt:A0A078I7C0EnsemblPlants:CDY45309ProteinID:CDY45309ProteinID:CDY45309.1
GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004743GO:GO:0005488GO:GO:0005975
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030955EnsemblPlantsGene:GSBRNA2T00081761001InterPro:IPR015806
InterPro:IPR036918PFAM:PF00224PFAM:PF02887ScanProsite:PS00110PANTHER:PTHR11817PANTHER:PTHR11817:SF5
MetaCyc:PWY-1042MetaCyc:PWY-2221MetaCyc:PWY-5484MetaCyc:PWY-5723MetaCyc:PWY-6142MetaCyc:PWY-6886
MetaCyc:PWY-6901MetaCyc:PWY-7003MetaCyc:PWY-7218MetaCyc:PWY-7383InterPro:Pyr_KnaseInterPro:Pyrv/PenolPyrv_Kinase-like_dom
InterPro:Pyrv_Knase_ASInterPro:Pyrv_Knase_CInterPro:Pyrv_Knase_C_sfInterPro:Pyrv_Knase_brlInterPro:Pyrv_Knase_insert_dom_sfSUPFAM:SSF51621
SUPFAM:SSF52935UniPathway:UPA00109UniParc:UPI0004EED2E4:::
Description
BnaA03g52820DBnaA03g52820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7C0]
Coordinates
chrLK032620:-:57001..58671
Molecular Weight (calculated)
34280.7 Da
IEP (calculated)
8.108
GRAVY (calculated)
-0.122
Length
311 amino acids
Sequence
(BLAST)
001: MTMKSTTKYQ LTTGKSPVAV YFNKISPGPA ESQLRFRNKV GQVCDTENGT VRCRCENSAM LSERKNVNLP GVVVDLPTLT EKDKEDIMKW GVPNQIDMIA
101: LSFVRKGSDL VQVRKLLRDH AKNILLMSKV ENQEGVANFD DILVNSDAFM IARGDLGMEI PIEKIFLAQK VMIYKCNIQG KPVVTAIQML ESMIKSPRPT
201: RAEATDVANA VLDGTDCVML SGETAAGAYP ELARIMQGGS TARLVAKYRP GMPILSVVVP GMKIDFFDWS CSDESPARHS LIFRRLIPVL YAGSARASHD
301: ESTEEAIQFA T
Best Arabidopsis Sequence Match ( AT4G26390.1 )
(BLAST)
001: MAMEQRPKTK IVCTLGPASR SVPMVEKLLM AGMSVARFNF SHGSYEYHQE TLDNLRQAML NTGMLCAVML DTKGPEIRTG FLKDGKPIQL KQGQEITIST
101: DYDLKGDEKT ICMSYKKLAQ DVNPGMVILC ADGTISLKVL SCDKEKGTVR CRCENTSMLG ERKNVNLPGV VVDLPTLTEK DKQDILEWGV PNQIDMIALS
201: FVRKGSDLVQ VRKLLGKHAK TILLMSKVEN QEGVANFDDI LINSDAFMIA RGDLGMEIPI EKIFLAQKVM IYKCNFMGKP VVTATQMLES MIKSPRPTRA
301: EATDVANAVL DGTDCVMLSG ETAAGAYPEL AVRTMAKICV EAESTLDYGD IFKRIMLHAA VPMSPMESLA SSAVRTATSS RATLMMVLTR GGSTARLVAK
401: YRPGIPILSV VVPEITSDSF DWACSNEAPA RHSLIYRGLV PVLYAGSARA SIDESTEETL EFASEYGKKK QLCKTGDSVV ALFRTGNAIV IKILTVK
Arabidopsis Description
Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXZ4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.