CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX67817
CDX68130
CDX69568
CDX69584
CDX69854
CDX70212
CDX71815
CDX71860
CDX72171
CDX77081
CDX85599
CDX89038
CDX91066
CDX92626
CDX96983
CDX97807
CDX98399
CDY03470
CDY03843
CDY04918
CDY05962
CDY09851
CDY09874
CDY10748
CDY10996
CDY14147
CDY23989
CDY24507
CDY26353
CDY27243
CDY28668
CDY28862
CDY29659
CDY30923
CDY32850
CDY34269
CDY36813
CDY37505
CDY39030
CDY41170
CDY44603
CDY44869
CDY45775
CDY47131
CDY47586
CDY52676
CDY52677
CDY56997
CDY58906
CDY65103
CDY65104
CDY65105
CDY69854
CDY70563

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22960.1	CDX68130	AT1G19680.1	21798944
AT3G22960.1	CDY39030	AT1G19680.1	21798944
AT3G22960.1	CDY24507	AT1G60010.1	21798944
AT3G22960.1	CDY30923	AT1G60010.1	21798944
AT3G22960.1	CDY69854	AT1G60010.1	21798944
AT3G22960.1	CDY70563	AT1G60010.1	21798944
AT3G22960.1	CDY03843	AT1G61590.1	21798944
AT3G22960.1	CDY26353	AT1G61590.1	21798944
AT3G22960.1	CDY47586	AT1G61590.1	21798944
AT3G22960.1	CDY52676	AT1G61590.1	21798944
AT3G22960.1	CDY52677	AT1G61590.1	21798944
AT3G22960.1	CDY65103	AT1G61590.1	21798944
AT3G22960.1	CDY65104	AT1G61590.1	21798944
AT3G22960.1	CDY65105	AT1G61590.1	21798944
AT3G22960.1	CDX97807	AT2G30580.1	21798944
AT3G22960.1	CDY10748	AT2G30580.1	21798944
AT3G22960.1	CDY23989	AT2G30580.1	21798944
AT3G22960.1	CDY29659	AT2G30580.1	21798944
AT3G22960.1	CDY47131	AT2G30580.1	21798944
AT3G22960.1	CDX77081	AT3G01690.1	21798944
AT3G22960.1	CDY28668	AT3G01690.1	21798944
AT3G22960.1	CDY28862	AT3G01690.1	21798944
AT3G22960.1	CDY32850	AT3G01690.1	21798944
AT3G22960.1	CDY37505	AT3G01690.1	21798944
AT3G22960.1	CDX72171	AT3G56130.1	21798944
AT3G22960.1	CDY27243	AT3G56130.1	21798944
AT3G22960.1	CDX67817	AT3G59920.1	21798944
AT3G22960.1	CDX71860	AT3G59920.1	21798944
AT3G22960.1	CDX89038	AT3G59920.1	21798944
AT3G22960.1	CDX98399	AT3G59920.1	21798944
AT3G22960.1	CDY05962	AT3G59920.1	21798944
AT3G22960.1	CDY45775	AT3G59920.1	21798944
AT3G22960.1	CDX71815	AT3G60360.1	21798944
AT3G22960.1	CDY41170	AT3G60360.1	21798944
AT3G22960.1	CDY56997	AT3G60360.1	21798944
AT3G22960.1	CDY58906	AT3G60360.1	21798944
AT3G22960.1	CDX92626	AT4G24240.1	21798944
AT3G22960.1	CDY03470	AT4G24240.1	21798944
AT3G22960.1	CDY10996	AT4G24240.1	21798944
AT3G22960.1	CDY34269	AT4G24240.1	21798944
AT3G22960.1	CDX70212	AT5G04600.1	21798944
AT3G22960.1	CDY04918	AT5G04600.1	21798944
AT3G22960.1	CDY14147	AT5G04600.1	21798944
AT3G22960.1	CDY44869	AT5G04600.1	21798944
AT3G22960.1	CDX69854	AT5G10210.1	21798944
AT3G22960.1	CDX96983	AT5G10210.1	21798944
AT3G22960.1	CDX69584	AT5G14390.1	21798944
AT3G22960.1	CDX85599	AT5G14390.1	21798944
AT3G22960.1	CDX91066	AT5G14390.1	21798944
AT3G22960.1	CDY09851	AT5G14390.1	21798944
AT3G22960.1	CDX69568	AT5G14660.1	21798944
AT3G22960.1	CDY09874	AT5G14660.1	21798944
AT3G22960.1	CDY36813	AT5G35410.1	21798944
AT3G22960.1	CDY44603	AT5G35410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023780.1-P	Field mustard	plastid	100.0	100.0
CDY40829	Canola	plastid	98.44	98.44
CDX92969	Canola	plastid	89.43	89.74
AT3G22960.1	Thale cress	plastid	92.37	89.43
CDX94878	Canola	plastid	89.43	88.81
GSMUA_Achr2P17520_001	Banana	cytosol	63.26	87.32
GSMUA_Achr7P16760_001	Banana	cytosol	23.92	86.79
KRG92440	Soybean	cytosol, nucleus	67.76	86.12
GSMUA_Achr4P21110_001	Banana	cytosol	61.7	85.17
GSMUA_Achr4P28510_001	Banana	cytosol	61.35	84.69
KRH34357	Soybean	nucleus	68.8	83.58
VIT_05s0020g04480.t01	Wine grape	plastid	80.07	78.84
Solyc09g082970.2.1	Tomato	plastid	79.03	76.9
Os07t0181000-01	Rice	plastid	74.18	76.29
Zm00001d034443_P001	Maize	plastid	75.04	75.44
EER95951	Sorghum	plastid	75.91	75.13
TraesCS2A01G240200.1	Wheat	plastid	74.18	75.09
TraesCS2D01G237900.1	Wheat	plastid	74.18	75.09
KXG37365	Sorghum	plastid	74.18	74.05
HORVU2Hr1G050140.1	Barley	plastid	73.83	70.53
Zm00001d018961_P002	Maize	plastid	75.39	70.27
VIT_00s0179g00350.t01	Wine grape	plastid	68.11	69.07
TraesCS2B01G257800.1	Wheat	plastid	72.79	68.07
CDY32285	Canola	plastid	38.82	39.23
CDY19645	Canola	plastid	39.17	38.9
CDY48872	Canola	plastid	38.47	38.88
CDY66652	Canola	plastid	38.99	38.79
CDY60911	Canola	plastid	38.99	38.79
CDY60039	Canola	cytosol	13.17	32.62
CDX81195	Canola	cytosol	13.17	32.62
CDY11933	Canola	cytosol, mitochondrion, plastid	23.22	30.88
CDY32790	Canola	cytosol	22.36	30.64
CDY46578	Canola	cytosol	22.36	30.64
CDX78344	Canola	cytosol	26.0	30.43
CDX81114	Canola	cytosol	26.0	30.43
CDY27175	Canola	cytosol, mitochondrion	23.57	30.09
CDY41529	Canola	cytosol	25.65	30.02
CDX84432	Canola	cytosol	25.65	30.02
CDY42677	Canola	cytosol	5.72	30.0
CDY45309	Canola	plastid	16.12	29.9
CDY21551	Canola	cytosol	26.34	29.8
CDY39852	Canola	cytosol	25.3	29.61
CDX69938	Canola	cytosol	26.17	29.61
CDY01123	Canola	cytosol	2.25	29.55
CDY66490	Canola	cytosol	24.96	29.27
CDY66977	Canola	cytosol	24.78	29.07
CDY50878	Canola	cytosol	24.61	28.98
CDX81194	Canola	cytosol	10.75	28.84
CDY36795	Canola	endoplasmic reticulum	19.58	28.68
CDX74201	Canola	cytosol	23.22	28.27
CDY60038	Canola	cytosol	10.75	28.05
CDX92057	Canola	cytosol	22.88	27.85
CDY42900	Canola	cytosol	22.53	27.54
CDY47408	Canola	cytosol	4.33	26.88
CDY04408	Canola	cytosol	4.33	26.88
CDY42678	Canola	cytosol	3.99	25.84
CDY26450	Canola	cytosol	4.16	25.81
CDY58286	Canola	cytosol, plastid	22.36	24.48
CDX76243	Canola	cytosol, plastid	22.18	24.29
CDX78139	Canola	cytosol, plastid	21.84	23.91
CDX73585	Canola	cytosol, plastid	21.84	23.91
CDY13321	Canola	cytosol, plastid	21.66	23.72
CDX72091	Canola	mitochondrion, plastid	18.89	23.64
CDX67554	Canola	cytosol, plastid	21.49	23.53
CDY00607	Canola	cytosol	15.08	22.54
CDY42679	Canola	mitochondrion	3.81	19.13
CDY69935	Canola	cytosol	14.9	17.84
CDX68515	Canola	mitochondrion	15.77	13.13
CDX83068	Canola	plastid	8.84	7.02

Protein Annotations

KEGG:00010+2.7.1.40	KEGG:00230+2.7.1.40	KEGG:00620+2.7.1.40	Gene3D:2.40.33.10	MapMan:3.12.8	Gene3D:3.20.20.60
Gene3D:3.40.1380.20	MapMan:5.1.2.1	GO:A0A078HDH4	UniProt:A0A078HDH4	EnsemblPlants:CDY35484	ProteinID:CDY35484
ProteinID:CDY35484.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004743	GO:GO:0005488
GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0030955	EnsemblPlantsGene:GSBRNA2T00058515001	InterPro:IPR015806	InterPro:IPR036918	PFAM:PF00224	PFAM:PF02887
PRINTS:PR01050	ScanProsite:PS00110	PANTHER:PTHR11817	PANTHER:PTHR11817:SF14	MetaCyc:PWY-1042	MetaCyc:PWY-2221
MetaCyc:PWY-5484	MetaCyc:PWY-5723	MetaCyc:PWY-6142	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003
MetaCyc:PWY-7218	MetaCyc:PWY-7383	InterPro:Pyr_Knase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	InterPro:Pyrv_Knase-like_insert_dom_sf	InterPro:Pyrv_Knase_AS
InterPro:Pyrv_Knase_C	InterPro:Pyrv_Knase_C_sf	InterPro:Pyrv_Knase_brl	InterPro:Pyrv_Knase_insert_dom_sf	SUPFAM:SSF50800	SUPFAM:SSF51621
SUPFAM:SSF52935	TIGRFAMs:TIGR01064	UniPathway:UPA00109	UniParc:UPI0002543F81	SEG:seg	:

Description

BnaA01g24280DPyruvate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078HDH4]

Coordinates

chrLK032353:+:25625..28057

Molecular Weight (calculated)

63292.6 Da

IEP (calculated)

5.886

GRAVY (calculated)

-0.167

Length

577 amino acids

Sequence
(BLAST)

001: MSHSIQFSTP SRTLHLPPTR LHPPLSSFSF RQFPLTSTFK HTSLRASSSP SPDSSSSSSL LHSPNGTPAV KPEERSSGID VDTVTEAELK ENGFRSTRRT
101: KLICTIGPAT CGFEQLSALA EGGMNVARLN MCHGTRDWHR DVIRSVRRLN EEKGFAVAIM MDTEGSEIHM GDLGGEASAK AEDGEVWTFT VRAFDASRPE
201: RTISVSYDGF AEDVRVGDEL LVDGGMVRFD VIEKIGPDVK CLCTDPGLLL PRANLTFWRD GSLVRERNAM LPTISSKDWL DIDFGIAEGV DFIAVSFVKS
301: AEVINHLKSY LAARPGGGDI GVIAKIESID SLTNLEEIIL ASDGAMVARG DLGAQIPLEQ VPAAQQRIVK VCRELNKPVI VASQLLESMI EYPTPTRAEV
401: ADVSEAVRQR SDALMLSGES AMGQFPDKAL TVLRSVSLRI ERWWREEKRY EATPLQAISS ASSDKISEEI CNSASKMANN LGVDAVFVYT KNGHMASLVS
501: RCRPDCPIFA FTNTTSVRRR LNLQWGLIPF RLSFSEDMES NLNKTFSLLK SRGMIKSGDL VIAVSDMLQS IQVMNVP

Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)

001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP

Arabidopsis Description

PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.