Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05962 | Canola | cytosol | 95.6 | 88.06 |
| CDX67817 | Canola | cytosol | 92.91 | 85.59 |
| CDX98399 | Canola | cytosol | 92.91 | 85.59 |
| CDX89038 | Canola | cytosol | 92.67 | 85.36 |
| CDY45775 | Canola | cytosol | 92.18 | 84.91 |
| AT3G59920.1 | Thale cress | cytosol | 91.93 | 84.68 |
| CDY17885 | Canola | cytosol | 89.24 | 82.21 |
| CDX79782 | Canola | cytosol | 89.24 | 82.21 |
| HORVU1Hr1G064490.8 | Barley | cytosol | 83.37 | 76.29 |
| TraesCS1B01G271700.1 | Wheat | cytosol | 82.89 | 76.18 |
| TraesCS1A01G260900.1 | Wheat | cytosol | 82.89 | 76.18 |
| TraesCS1D01G260900.1 | Wheat | cytosol, golgi | 82.89 | 76.18 |
| Os05t0418000-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 82.64 | 75.96 |
| Os05t0304400-01 | Rice | plasma membrane | 82.64 | 75.96 |
| KRH59137 | Soybean | endoplasmic reticulum | 82.15 | 75.68 |
| KRH43030 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.15 | 75.68 |
| EES18242 | Sorghum | cytosol | 81.91 | 75.28 |
| KXG22017 | Sorghum | cytosol | 81.66 | 75.06 |
| GSMUA_Achr7P23620_001 | Banana | cytosol | 80.93 | 74.89 |
| Solyc12g017570.1.1 | Tomato | plastid | 81.17 | 74.77 |
| TraesCS1B01G271800.2 | Wheat | cytosol, golgi | 80.93 | 74.22 |
| VIT_05s0094g01550.t01 | Wine grape | cytosol | 80.44 | 74.1 |
| TraesCS1A01G261000.1 | Wheat | cytosol | 80.44 | 73.77 |
| Zm00001d010255_P001 | Maize | cytosol, extracellular | 81.66 | 73.57 |
| PGSC0003DMT400035649 | Potato | cytosol | 79.46 | 73.2 |
| Solyc08g015860.2.1 | Tomato | extracellular | 78.97 | 72.75 |
| GSMUA_Achr6P18380_001 | Banana | cytosol | 79.22 | 72.48 |
| TraesCS5B01G042400.1 | Wheat | cytosol | 78.48 | 72.13 |
| TraesCS5A01G041100.1 | Wheat | cytosol | 78.24 | 71.91 |
| EER98346 | Sorghum | cytosol | 78.0 | 71.52 |
| Os07t0271000-01 | Rice | plasma membrane | 78.0 | 71.52 |
| TraesCS5D01G048100.1 | Wheat | cytosol | 77.75 | 71.46 |
| Zm00001d010251_P003 | Maize | cytosol | 81.42 | 71.15 |
| Zm00001d007315_P001 | Maize | cytosol | 30.32 | 69.66 |
| CDX81131 | Canola | cytosol | 75.79 | 69.66 |
| CDY56553 | Canola | cytosol | 75.55 | 69.44 |
| CDY21587 | Canola | cytosol | 75.31 | 69.21 |
| GSMUA_Achr10P... | Banana | cytosol | 74.08 | 68.24 |
| HORVU1Hr1G064480.1 | Barley | cytosol | 74.08 | 67.94 |
| CDX69899 | Canola | cytosol | 50.61 | 65.71 |
| Zm00001d005498_P001 | Maize | cytosol | 79.22 | 65.59 |
| Zm00001d038200_P002 | Maize | plastid | 80.68 | 64.96 |
| TraesCS1D01G261000.1 | Wheat | golgi | 80.68 | 63.22 |
| CDY65664 | Canola | cytosol | 60.39 | 60.24 |
| HORVU5Hr1G009840.1 | Barley | cytosol | 78.24 | 58.61 |
| Zm00001d009786_P001 | Maize | plastid | 45.48 | 54.23 |
| Zm00001d011867_P001 | Maize | cytosol | 46.21 | 51.64 |
| HORVU2Hr1G104740.2 | Barley | mitochondrion | 11.74 | 51.06 |
| HORVU7Hr1G075170.1 | Barley | mitochondrion | 13.2 | 49.09 |
| CDY44805 | Canola | cytosol | 74.33 | 48.33 |
| Zm00001d016318_P002 | Maize | cytosol | 31.78 | 45.94 |
| CDY42416 | Canola | endoplasmic reticulum, extracellular | 13.2 | 45.38 |
| CDY05966 | Canola | cytosol | 31.54 | 31.77 |
| CDX71865 | Canola | cytosol, mitochondrion | 24.45 | 31.55 |
| CDY23584 | Canola | cytosol, nucleus, peroxisome | 10.76 | 28.76 |
| CDY24684 | Canola | cytosol | 25.67 | 18.55 |
| CDY34947 | Canola | cytosol, plastid, vacuole | 23.72 | 17.7 |
| CDY05274 | Canola | plastid | 23.96 | 17.47 |
Protein Annotations
| Gene3D:1.10.405.10 | MapMan:22.8.4.2 | Gene3D:3.30.519.10 | Gene3D:3.50.50.60 | GO:A0A078C4T3 | EnsemblPlants:CDX71860 |
| ProteinID:CDX71860 | ProteinID:CDX71860.1 | InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor | GO:GO:0003674 | GO:GO:0005092 |
| GO:GO:0005093 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00155590001 | InterPro:IPR036188 | PFAM:PF00996 |
| PRINTS:PR00891 | PRINTS:PR00892 | PANTHER:PTHR11787 | PANTHER:PTHR11787:SF11 | InterPro:RabGDI | SUPFAM:SSF51905 |
| UniParc:UPI0004EEABFA | SEG:seg | : | : | : | : |
Description
BnaC08g30140D
Coordinates
chrLK031795:-:881088..883899
Molecular Weight (calculated)
45405.6 Da
IEP (calculated)
6.240
GRAVY (calculated)
-0.176
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEYEVIVL GTGLKECILS GLLSVDGVKV LHMDRSDYYG GESTSLNLNQ LWKKFRGEEK APEHLGASRD YNVDMMPKFM MGNGKLVRTL IHTDVTKYLS
101: FKAVDGSYVF VKGKVQKVPV TPMEAMKSNL MGIFEKRRAG KFFGYLALRV ANHLDGWKFG LDDNTIEFIG HAIALHTNDQ HLHQPALDTV MRMKLYAESL
201: ARFQGSSPYI YPLYGLGELP QAFARLSAVY GGTYMLNKPD CTVEFDEEGK VTGVTSEGET AKCKKVVCDP SYLPNKVNKI GRVARAIAIM SHPIPNTNDS
301: HSVQVIIPQK QLARKSDMYV FCCSYSHNVA PKGKFIAFVS TDAETDNPQT ELKAGIDLLG PVDEIFFDIY DATTHFETTV ADVLNMYTLI TGKQLDLSVD
401: LSAASAAEE
101: FKAVDGSYVF VKGKVQKVPV TPMEAMKSNL MGIFEKRRAG KFFGYLALRV ANHLDGWKFG LDDNTIEFIG HAIALHTNDQ HLHQPALDTV MRMKLYAESL
201: ARFQGSSPYI YPLYGLGELP QAFARLSAVY GGTYMLNKPD CTVEFDEEGK VTGVTSEGET AKCKKVVCDP SYLPNKVNKI GRVARAIAIM SHPIPNTNDS
301: HSVQVIIPQK QLARKSDMYV FCCSYSHNVA PKGKFIAFVS TDAETDNPQT ELKAGIDLLG PVDEIFFDIY DATTHFETTV ADVLNMYTLI TGKQLDLSVD
401: LSAASAAEE
001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
Arabidopsis Description
GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.