CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69899	Canola	cytosol	70.34	99.37
Bra009390.1-P	Field mustard	cytosol	99.33	99.33
AT5G09550.1	Thale cress	cytosol	97.53	97.53
CDX81131	Canola	cytosol	97.08	97.08
CDY56553	Canola	cytosol	97.08	97.08
CDY65664	Canola	cytosol	82.7	89.76
KRH49823	Soybean	cytosol, endoplasmic reticulum	86.07	86.07
KRH42088	Soybean	cytosol	85.62	85.62
VIT_03s0017g00490.t01	Wine grape	cytosol	68.31	83.29
Solyc01g105810.2.1	Tomato	cytosol, unclear	82.92	82.92
Zm00001d029596_P001	Maize	cytosol, extracellular	82.25	81.88
TraesCS4B01G205900.1	Wheat	cytosol, golgi	82.25	81.88
Os03t0277000-01	Rice	plasma membrane	82.25	81.88
EER92083	Sorghum	cytosol	82.25	81.88
TraesCS4D01G206900.1	Wheat	cytosol	82.02	81.66
CDX67817	Canola	cytosol	77.3	77.48
CDX98399	Canola	cytosol	77.3	77.48
CDY17885	Canola	cytosol	76.63	76.8
CDX79782	Canola	cytosol	76.63	76.8
CDY45775	Canola	cytosol	76.18	76.35
CDX89038	Canola	cytosol	76.18	76.35
CDY05962	Canola	cytosol	75.51	75.68
TraesCS4A01G098400.1	Wheat	cytosol	82.25	75.62
CDX71860	Canola	cytosol	69.21	75.31
CDY44805	Canola	cytosol	95.73	67.73
GSMUA_Achr7P02930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	17.3	66.96
GSMUA_Achr7P02920_001	Banana	cytosol	13.71	59.8
CDY42416	Canola	endoplasmic reticulum, extracellular	13.48	50.42
HORVU4Hr1G059230.1	Barley	cytosol	7.87	49.3
CDY05966	Canola	cytosol	27.19	29.8
CDX71865	Canola	cytosol, mitochondrion	20.67	29.02
CDY23584	Canola	cytosol, nucleus, peroxisome	9.89	28.76
CDY24684	Canola	cytosol	25.84	20.32
CDY34947	Canola	cytosol, plastid, vacuole	24.27	19.71
CDY05274	Canola	plastid	24.27	19.25

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	GO:A0A078G9B7	UniProt:A0A078G9B7
EnsemblPlants:CDY21587	ProteinID:CDY21587	ProteinID:CDY21587.1	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674
GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00016053001	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891
PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI	SUPFAM:SSF51905	SUPFAM:SSF54373
UniParc:UPI0004EE0D6F	SEG:seg	:	:	:	:

Description

BnaC09g47050DGuanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A078G9B7]

Coordinates

chrLK032122:+:365099..367627

Molecular Weight (calculated)

49533.0 Da

IEP (calculated)

5.052

GRAVY (calculated)

-0.264

Length

445 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGAIRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY NKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDGYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSD KVKKVGKVAR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPIDEI FYHSYDTYVP TNKQEEDNCF
401: ISGTYDATTH FESTVVDVLE MYTKITGKTL DLSVDLSAAS ATAEK

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.