Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69899 | Canola | cytosol | 68.78 | 89.52 |
| Bra009390.1-P | Field mustard | cytosol | 90.0 | 82.92 |
| CDY21587 | Canola | cytosol | 89.76 | 82.7 |
| AT5G09550.1 | Thale cress | cytosol | 88.54 | 81.57 |
| CDX81131 | Canola | cytosol | 88.29 | 81.35 |
| CDY56553 | Canola | cytosol | 88.05 | 81.12 |
| VIT_03s0017g00490.t01 | Wine grape | cytosol | 64.15 | 72.05 |
| KRH49823 | Soybean | cytosol, endoplasmic reticulum | 76.83 | 70.79 |
| KRH42088 | Soybean | cytosol | 76.59 | 70.56 |
| TraesCS4B01G205900.1 | Wheat | cytosol, golgi | 74.39 | 68.23 |
| TraesCS4D01G206900.1 | Wheat | cytosol | 74.15 | 68.01 |
| Zm00001d029596_P001 | Maize | cytosol, extracellular | 73.66 | 67.56 |
| Os03t0277000-01 | Rice | plasma membrane | 73.66 | 67.56 |
| EER92083 | Sorghum | cytosol | 73.66 | 67.56 |
| Solyc01g105810.2.1 | Tomato | cytosol, unclear | 73.17 | 67.42 |
| CDX67817 | Canola | cytosol | 68.78 | 63.51 |
| CDX98399 | Canola | cytosol | 68.78 | 63.51 |
| TraesCS4A01G098400.1 | Wheat | cytosol | 74.39 | 63.02 |
| CDX79782 | Canola | cytosol | 68.05 | 62.84 |
| CDY17885 | Canola | cytosol | 68.05 | 62.84 |
| CDY45775 | Canola | cytosol | 67.8 | 62.61 |
| CDX89038 | Canola | cytosol | 67.8 | 62.61 |
| CDY05962 | Canola | cytosol | 66.83 | 61.71 |
| CDX71860 | Canola | cytosol | 60.24 | 60.39 |
| CDY44805 | Canola | cytosol | 88.05 | 57.39 |
| GSMUA_Achr7P02930_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 14.88 | 53.04 |
| CDY42416 | Canola | endoplasmic reticulum, extracellular | 13.41 | 46.22 |
| GSMUA_Achr7P02920_001 | Banana | cytosol | 9.76 | 39.22 |
| CDY23584 | Canola | cytosol, nucleus, peroxisome | 10.49 | 28.1 |
| CDY05966 | Canola | cytosol | 27.32 | 27.59 |
| CDX71865 | Canola | cytosol, mitochondrion | 20.24 | 26.18 |
| HORVU4Hr1G059230.1 | Barley | cytosol | 3.9 | 22.54 |
| CDY24684 | Canola | cytosol | 24.15 | 17.49 |
| CDY34947 | Canola | cytosol, plastid, vacuole | 22.68 | 16.97 |
| CDY05274 | Canola | plastid | 22.44 | 16.4 |
Protein Annotations
| Gene3D:1.10.405.10 | MapMan:22.8.4.2 | Gene3D:3.30.519.10 | Gene3D:3.50.50.60 | GO:A0A078JG49 | UniProt:A0A078JG49 |
| EnsemblPlants:CDY65664 | ProteinID:CDY65664 | ProteinID:CDY65664.1 | InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor | GO:GO:0003674 |
| GO:GO:0005092 | GO:GO:0005093 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00047951001 | InterPro:IPR036188 | PFAM:PF00996 | PRINTS:PR00891 |
| PRINTS:PR00892 | PANTHER:PTHR11787 | PANTHER:PTHR11787:SF10 | InterPro:RabGDI | SUPFAM:SSF51905 | SUPFAM:SSF54373 |
| UniParc:UPI0004EE7CAE | : | : | : | : | : |
Description
BnaC09g54770DGuanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A078JG49]
Coordinates
chrLK034883:-:300..2545
Molecular Weight (calculated)
46038.6 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.352
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEYDVIWS PLCRWPQVLH MDRNDSYGGE SSSLNLTQLW KRFRGSDTPQ ENLGAIREYN VDMIPKFIMA NGLLLSFVYN KGKIYKVPAT DVEALKSPLM
101: GLFEKRRARK FFIYVQDYDE KDSKSHEGLD LSKVTAREII SKYGLEDDTI DFIGHALALH NDDDYLDQPA IDFVKRIKLY AESLARFQGG SPYIYPLYGL
201: GELPQAFARL SAVYGGTYML NKPECKVEFD GSGKAIGVTS AGETAKCKKV VCDPSYLSDK VKKVGKVTRA VCIMSHPIPD TNEAHSVQII LPQKQLGRKS
301: DINHSDCVGT YSVAHNVAPK GKYIAFVSAE AETDNPEEEL KAGIELLGPI DEIFYHSYDT YVPTNKQEED NCFISGTYDA TTHFESTVVD VLEMYTICLY
401: AQPILPKEAS
101: GLFEKRRARK FFIYVQDYDE KDSKSHEGLD LSKVTAREII SKYGLEDDTI DFIGHALALH NDDDYLDQPA IDFVKRIKLY AESLARFQGG SPYIYPLYGL
201: GELPQAFARL SAVYGGTYML NKPECKVEFD GSGKAIGVTS AGETAKCKKV VCDPSYLSDK VKKVGKVTRA VCIMSHPIPD TNEAHSVQII LPQKQLGRKS
301: DINHSDCVGT YSVAHNVAPK GKYIAFVSAE AETDNPEEEL KAGIELLGPI DEIFYHSYDT YVPTNKQEED NCFISGTYDA TTHFESTVVD VLEMYTICLY
401: AQPILPKEAS
001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
Arabidopsis Description
GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.