Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009390.1-P | Field mustard | cytosol | 99.37 | 70.34 |
| CDY21587 | Canola | cytosol | 99.37 | 70.34 |
| VIT_03s0017g00490.t01 | Wine grape | cytosol | 80.95 | 69.86 |
| CDY56553 | Canola | cytosol | 97.46 | 68.99 |
| CDY65664 | Canola | cytosol | 89.52 | 68.78 |
| AT5G09550.1 | Thale cress | cytosol | 97.14 | 68.76 |
| CDX81131 | Canola | cytosol | 96.83 | 68.54 |
| GSMUA_Achr7P02930_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 24.44 | 66.96 |
| KRH49823 | Soybean | cytosol, endoplasmic reticulum | 83.17 | 58.88 |
| KRH42088 | Soybean | cytosol | 82.86 | 58.65 |
| TraesCS4D01G206900.1 | Wheat | cytosol | 81.59 | 57.49 |
| TraesCS4B01G205900.1 | Wheat | cytosol, golgi | 81.59 | 57.49 |
| Zm00001d029596_P001 | Maize | cytosol, extracellular | 81.27 | 57.27 |
| Os03t0277000-01 | Rice | plasma membrane | 81.27 | 57.27 |
| EER92083 | Sorghum | cytosol | 80.95 | 57.05 |
| Solyc01g105810.2.1 | Tomato | cytosol, unclear | 79.68 | 56.4 |
| CDX67817 | Canola | cytosol | 76.19 | 54.05 |
| CDX98399 | Canola | cytosol | 76.19 | 54.05 |
| CDX79782 | Canola | cytosol | 75.24 | 53.38 |
| CDY17885 | Canola | cytosol | 75.24 | 53.38 |
| TraesCS4A01G098400.1 | Wheat | cytosol | 81.9 | 53.31 |
| CDY05962 | Canola | cytosol | 74.92 | 53.15 |
| CDY45775 | Canola | cytosol | 74.29 | 52.7 |
| CDX89038 | Canola | cytosol | 74.29 | 52.7 |
| CDX71860 | Canola | cytosol | 65.71 | 50.61 |
| CDY42416 | Canola | endoplasmic reticulum, extracellular | 19.05 | 50.42 |
| CDY44805 | Canola | cytosol | 94.92 | 47.54 |
| CDY05966 | Canola | cytosol | 35.56 | 27.59 |
| CDX71865 | Canola | cytosol, mitochondrion | 27.3 | 27.13 |
| CDY23584 | Canola | cytosol, nucleus, peroxisome | 13.02 | 26.8 |
| CDY24684 | Canola | cytosol | 23.49 | 13.07 |
| CDY34947 | Canola | cytosol, plastid, vacuole | 22.54 | 12.96 |
| CDY05274 | Canola | plastid | 21.9 | 12.3 |
| HORVU4Hr1G059230.1 | Barley | cytosol | 1.9 | 8.45 |
| GSMUA_Achr7P02920_001 | Banana | cytosol | 1.27 | 3.92 |
Protein Annotations
| Gene3D:1.10.405.10 | MapMan:22.8.4.2 | Gene3D:3.30.519.10 | Gene3D:3.50.50.60 | GO:A0A078C143 | EnsemblPlants:CDX69899 |
| ProteinID:CDX69899 | ProteinID:CDX69899.1 | InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor | GO:GO:0003674 | GO:GO:0005092 |
| GO:GO:0005093 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00135968001 | InterPro:IPR036188 | PFAM:PF00996 |
| PRINTS:PR00891 | PRINTS:PR00892 | PANTHER:PTHR11787 | PANTHER:PTHR11787:SF10 | InterPro:RabGDI | SUPFAM:SSF51905 |
| SUPFAM:SSF54373 | UniParc:UPI0004EE4EE4 | SEG:seg | : | : | : |
Description
BnaA10g22480D
Coordinates
chrLK031790:-:2280035..2281750
Molecular Weight (calculated)
35043.5 Da
IEP (calculated)
5.017
GRAVY (calculated)
-0.327
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP AIDFVKRIKL YAESLARFQG GSPYIYPLYG
101: LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSD KVKKVGKVAR AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK
201: SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPIDEI FYHSYDTYVP TNKQEEDNCF ISGTYDATTH FESTVVDVLE MYTKITGKTL
301: DLSVDLSAAS ATAEK
101: LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSD KVKKVGKVAR AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK
201: SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPIDEI FYHSYDTYVP TNKQEEDNCF ISGTYDATTH FESTVVDVLE MYTKITGKTL
301: DLSVDLSAAS ATAEK
001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
Arabidopsis Description
GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.