CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029596_P001	Maize	cytosol, extracellular	97.32	97.32
Os03t0277000-01	Rice	plasma membrane	94.63	94.63
TraesCS4B01G205900.1	Wheat	cytosol, golgi	93.29	93.29
TraesCS4D01G206900.1	Wheat	cytosol	92.84	92.84
GSMUA_Achr10P...	Banana	cytosol	87.92	88.12
GSMUA_Achr10P...	Banana	cytosol	87.7	87.89
GSMUA_Achr9P03980_001	Banana	cytosol	86.8	87.0
TraesCS4A01G098400.1	Wheat	cytosol	92.84	85.74
KRH42088	Soybean	cytosol	83.89	84.27
KRH49823	Soybean	cytosol, endoplasmic reticulum	83.67	84.04
AT5G09550.1	Thale cress	cytosol	82.1	82.47
Bra009390.1-P	Field mustard	cytosol	81.88	82.25
CDX81131	Canola	cytosol	81.88	82.25
CDY21587	Canola	cytosol	81.88	82.25
Bra006026.1-P	Field mustard	cytosol	80.76	82.23
CDY56553	Canola	cytosol	81.66	82.02
VIT_03s0017g00490.t01	Wine grape	cytosol	66.89	81.92
EES18242	Sorghum	cytosol	80.76	81.12
CDX69899	Canola	cytosol	57.05	80.95
KXG22017	Sorghum	cytosol	80.09	80.45
HORVU4Hr1G059240.2	Barley	cytosol	93.29	80.04
Solyc01g105810.2.1	Tomato	cytosol, unclear	79.64	80.0
EER98346	Sorghum	cytosol	78.97	79.15
VIT_00s2317g00010.t01	Wine grape	cytosol	23.27	73.76
CDY65664	Canola	cytosol	67.56	73.66
KRH71651	Soybean	cytosol, nucleus, peroxisome	28.64	65.31
Bra028630.1-P	Field mustard	cytosol	80.76	58.89
CDY44805	Canola	cytosol	80.31	57.07
KRH66563	Soybean	cytosol	43.85	35.19
KXG32246	Sorghum	cytosol, nucleus, peroxisome	25.06	20.04
VIT_00s0313g00050.t01	Wine grape	cytosol, nucleus	66.0	15.84

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	EntrezGene:8063216	UniProt:C5WVL2
EnsemblPlants:EER92083	ProteinID:EER92083	ProteinID:EER92083.1	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674
GO:GO:0003824	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015031	GO:GO:0016491	GO:GO:0030234	GO:GO:0048046
GO:GO:0050790	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787
PANTHER:PTHR11787:SF10	InterPro:RabGDI	EnsemblPlantsGene:SORBI_3001G329200	SUPFAM:SSF51905	SUPFAM:SSF54373	unigene:Sbi.17634
UniParc:UPI0001A81FEF	RefSeq:XP_002465085.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:61673857..61677824

Molecular Weight (calculated)

50145.9 Da

IEP (calculated)

5.389

GRAVY (calculated)

-0.341

Length

447 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECIIS GLLSVDGLKV LHMDRNDYYG GESSSLNLIK LWKRFKGNDS PPEHLGISKE YNVDMVPKFM MANGALVRVL IHTSVTKYLN
101: FKAVDGSFVY NNGKIHKVPA TDVEALKSNL MGLFEKRRAR KFFIYVQDYE EDDPKSHEGL DLTKVTTKEV ISKYGLEDDT VDFIGHALAL HRDDSYLDEP
201: AIDTVKRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DESGKAYGVT SEGETAKCKK IVCDPSYLPE KVKKVGRVAR
301: AICIMKHPIP DTKDSHSVQI ILPKKQLKRK SDMYVFCCSY AHNVAPKGKF IAFVSTEAET DKPEIELKPG IDLLGPVEET FFDIYDRYEP INNPEEDSCF
401: LTNSYDSTTH FETTVKDVLA LYNKITGKEL DLSVDLNAAS AAEQEAA

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.