CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71651	Soybean	cytosol, nucleus, peroxisome	21.72	61.73
KRG99022	Soybean	cytosol	12.39	58.97
KRH59137	Soybean	endoplasmic reticulum	38.6	48.42
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	38.24	47.97
KRH42088	Soybean	cytosol	35.91	44.94
KRH49823	Soybean	cytosol, endoplasmic reticulum	35.55	44.49
VIT_03s0017g00490.t01	Wine grape	cytosol	29.08	44.38
EER92083	Sorghum	cytosol	35.19	43.85
Zm00001d029596_P001	Maize	cytosol, extracellular	34.83	43.4
TraesCS4B01G205900.1	Wheat	cytosol, golgi	34.83	43.4
Os03t0277000-01	Rice	plasma membrane	34.65	43.18
TraesCS4D01G206900.1	Wheat	cytosol	34.65	43.18
Solyc01g105810.2.1	Tomato	cytosol, unclear	33.75	42.25
TraesCS4A01G098400.1	Wheat	cytosol	34.65	39.88
HORVU4Hr1G059230.1	Barley	cytosol	4.85	38.03
GSMUA_Achr7P02920_001	Banana	cytosol	6.1	33.33
KRH05675	Soybean	extracellular, vacuole	5.92	16.58
GSMUA_Achr7P02930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	3.41	16.52
KRH28917	Soybean	cytosol, peroxisome, plastid	13.82	13.97
KRH76543	Soybean	cytosol, peroxisome, plasma membrane	13.82	13.92

Protein Annotations

Gene3D:1.10.405.10	MapMan:17.2.10	MapMan:19.1.6.1	MapMan:22.8.4.2	Gene3D:3.30.230.80	Gene3D:3.30.519.10
Gene3D:3.30.930.10	Gene3D:3.40.50.11260	UniProt:A0A0R0KPW1	EMBL:ACUP02001982	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor
EnsemblPlantsGene:GLYMA_03G114400	GO:GO:0000166	GO:GO:0003674	GO:GO:0005092	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006457	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0030234
GO:GO:0050790	GO:GO:0051082	InterPro:Hsp90_fam	InterPro:IPR036188	EnsemblPlants:KRH66563	ProteinID:KRH66563
ProteinID:KRH66563.1	PFAM:PF00183	PFAM:PF00996	PFAM:PF13393	PANTHER:PTHR11528	PANTHER:PTHR11528:SF71
InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF51905	SUPFAM:SSF54211	SUPFAM:SSF55681	UniParc:UPI0006EE1107	:

Description

hypothetical protein

Coordinates

chr3:-:32149520..32151391

Molecular Weight (calculated)

64908.1 Da

IEP (calculated)

8.769

GRAVY (calculated)

-0.299

Length

557 amino acids

Sequence
(BLAST)

001: MDEEYDVNML GTGLKECILN GLLSVVGLRR FRGDDKSLLY LGTSRDYNIH MNPKFIMANG NLVRVLIHAN VTKYLYFKAV DGSYVFNKGK VHKVPANDME
101: TLKSLLMGLF AKHWTHKFFI YVQKYNENFI GHALALHSDD RYLAELALDI VKRIKLYAES LVHFQGGSPY IYPLYGLGEL PQAFSQLSVV YGETYMLNKP
201: ECKVEFDEEG KIVGVTSEGE LLFLRYDLTI PFARFVAMNG LTSFKRYQIA KVYRVNNSSK GRYREFYQCD FDTAGNPSVS EIMGPDFEVV RILTELVNEL
301: DIGECEIKLN DRKLLDGMLQ IRRVPRENFR TICSNIDKLD KQSFQQLRKE MVAEKGLTAE TTNRIETEEH LPVKNFSVAG HQEFKVVLFI PMRAPFNLFD
401: TRKNPNKIKL YVLRVFIMDN CKELMPKYLS FVKEMLQQNK ILKLVKKCIE MFFEIVENKK DYNRFYEAFL KYLKLGIHEV SHNKTKLVEL LRYHPTKNGD
501: EMTSLKDYVT RMKEGQNDIY YITGESKKVV ENSPFLEKLK KKGYEVLYMV DAIDEYV

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.