Factsheet for TraesCS4D01G206900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G205900.1	Wheat	cytosol, golgi	99.11	99.11
Os03t0277000-01	Rice	plasma membrane	93.96	93.96
Zm00001d029596_P001	Maize	cytosol, extracellular	93.29	93.29
EER92083	Sorghum	cytosol	92.84	92.84
TraesCS4A01G098400.1	Wheat	cytosol	98.66	91.12
GSMUA_Achr10P...	Banana	cytosol	86.35	86.55
GSMUA_Achr9P03980_001	Banana	cytosol	86.13	86.32
GSMUA_Achr10P...	Banana	cytosol	85.91	86.1
KRH42088	Soybean	cytosol	84.12	84.49
KRH49823	Soybean	cytosol, endoplasmic reticulum	83.67	84.04
HORVU4Hr1G059240.2	Barley	cytosol	97.54	83.69
VIT_03s0017g00490.t01	Wine grape	cytosol	67.56	82.74
CDY21587	Canola	cytosol	81.66	82.02
Bra009390.1-P	Field mustard	cytosol	81.66	82.02
CDY56553	Canola	cytosol	81.43	81.8
CDX81131	Canola	cytosol	81.43	81.8
Bra006026.1-P	Field mustard	cytosol	80.31	81.78
CDX69899	Canola	cytosol	57.49	81.59
AT5G09550.1	Thale cress	cytosol	81.21	81.57
TraesCS1D01G260900.1	Wheat	cytosol, golgi	79.42	79.78
Solyc01g105810.2.1	Tomato	cytosol, unclear	78.3	78.65
TraesCS5D01G048100.1	Wheat	cytosol	77.63	77.98
CDY65664	Canola	cytosol	68.01	74.15
VIT_00s2317g00010.t01	Wine grape	cytosol	23.27	73.76
TraesCS1D01G261000.1	Wheat	golgi	79.87	68.39
KRH71651	Soybean	cytosol, nucleus, peroxisome	28.19	64.29
Bra028630.1-P	Field mustard	cytosol	80.54	58.73
CDY44805	Canola	cytosol	80.31	57.07
KRH66563	Soybean	cytosol	43.18	34.65
TraesCS3D01G189700.1	Wheat	cytosol, nucleus, peroxisome	23.49	18.75
VIT_00s0313g00050.t01	Wine grape	cytosol, nucleus	66.44	15.95

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor
GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	InterPro:IPR036188
PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI
SUPFAM:SSF51905	SUPFAM:SSF54373	EnsemblPlantsGene:TraesCS4D01G206900	EnsemblPlants:TraesCS4D01G206900.1	:	:

Description

No Description!

Coordinates

chr4D:+:354821677..354824564

Molecular Weight (calculated)

49968.6 Da

IEP (calculated)

5.520

GRAVY (calculated)

-0.310

Length

447 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECILS GILSVDGLKV LHMDRNDYYG GESTSLNLAK IWKRFKGSDT TPDHLGVSKE YNVDMVPKFM MANGALVRVL IRTSVTKYLN
101: FKAVDGSFVY NNGKIHKVPA TDVEALKSNL MGLFEKRRAR KFFIYVQDYE EDDAKSHEGL DLHKVTTREL ISKYGLEDDT VDFIGHALAL HRDDNYLDEP
201: AIDTVKRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DESGKAFGVT SEGETAKCKK VVCDPSYLPD KVKKVGRVAR
301: AICIMKHPIP DTKDSHSVQI ILPKKQLKRK SDMYVFCCSY AHNVAPKGKF VAFVSTEAET DKPEIELKPG IDLLGPVEET FFDMYDRFEP VNAAEEDNCF
401: LTTSYDATTH FETTVKDVLA LYSKITGKEL DLSVDLNAAS AGENDAA

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.