Subcellular Localization
min:
: max
Winner_takes_all: unclear, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
unclear:
26455813
|
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH49823 | Soybean | cytosol, endoplasmic reticulum | 84.72 | 84.72 |
VIT_03s0017g00490.t01 | Wine grape | cytosol | 69.44 | 84.66 |
KRH42088 | Soybean | cytosol | 84.27 | 84.27 |
Bra009390.1-P | Field mustard | cytosol | 82.92 | 82.92 |
CDY21587 | Canola | cytosol | 82.92 | 82.92 |
CDY56553 | Canola | cytosol | 82.7 | 82.7 |
AT5G09550.1 | Thale cress | cytosol | 82.47 | 82.47 |
CDX81131 | Canola | cytosol | 82.25 | 82.25 |
Bra006026.1-P | Field mustard | cytosol | 81.12 | 82.23 |
Solyc12g017570.1.1 | Tomato | plastid | 81.57 | 81.76 |
Solyc08g015860.2.1 | Tomato | extracellular | 80.9 | 81.08 |
CDX69899 | Canola | cytosol | 56.4 | 79.68 |
EER92083 | Sorghum | cytosol | 80.0 | 79.64 |
Zm00001d029596_P001 | Maize | cytosol, extracellular | 79.78 | 79.42 |
Os03t0277000-01 | Rice | plasma membrane | 79.1 | 78.75 |
TraesCS4B01G205900.1 | Wheat | cytosol, golgi | 79.1 | 78.75 |
TraesCS4D01G206900.1 | Wheat | cytosol | 78.65 | 78.3 |
CDY65664 | Canola | cytosol | 67.42 | 73.17 |
TraesCS4A01G098400.1 | Wheat | cytosol | 78.2 | 71.9 |
GSMUA_Achr7P02930_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 16.85 | 65.22 |
KRH71651 | Soybean | cytosol, nucleus, peroxisome | 27.64 | 62.76 |
GSMUA_Achr7P02920_001 | Banana | cytosol | 14.16 | 61.76 |
Bra028630.1-P | Field mustard | cytosol | 81.8 | 59.38 |
CDY44805 | Canola | cytosol | 81.8 | 57.87 |
HORVU4Hr1G059230.1 | Barley | cytosol | 8.09 | 50.7 |
KRH66563 | Soybean | cytosol | 42.25 | 33.75 |
Solyc02g082730.2.1 | Tomato | extracellular | 24.72 | 19.93 |
Protein Annotations
Gene3D:1.10.405.10 | MapMan:22.8.4.2 | Gene3D:3.30.519.10 | Gene3D:3.50.50.60 | UniProt:A5CKE3 | ProteinID:CAM97308.1 |
InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor | GO:GO:0003674 | GO:GO:0005092 | GO:GO:0005093 | GO:GO:0005575 |
GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0030234 | GO:GO:0048046 |
GO:GO:0050790 | InterPro:IPR036188 | PFAM:PF00996 | PRINTS:PR00891 | PRINTS:PR00892 | PANTHER:PTHR11787 |
PANTHER:PTHR11787:SF10 | InterPro:RabGDI | SUPFAM:SSF51905 | SUPFAM:SSF54373 | EnsemblPlantsGene:Solyc01g105810.2 | EnsemblPlants:Solyc01g105810.2.1 |
UniParc:UPI000150B02A | : | : | : | : | : |
Description
Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A5CKE3]
Coordinates
chr1:+:93849291..93855176
Molecular Weight (calculated)
49613.1 Da
IEP (calculated)
4.848
GRAVY (calculated)
-0.254
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDKNDYYG GESSSLNLIQ LWKRFRGNDQ PPEELGTSKE YNVDMIPKFA MANGTLVRVL IHTDVTKYLN
101: FKAVDGSFVY NKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFLYVQDFE ETDPKTHEGM DLNKITAKEF IAKYELEDDT IDFIGHALAL CTDDNYLAQP
201: AMDFIKRVKL YAESLARFQA GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPQCKVEF DDGGKVVGVT SEGETAKCKK VVCDPSYLPD KVQKVGKVAR
301: AICIMSHPIP NTNDSHSAQV ILPQKQLGRK SDMYLFCCSY SHNVAPKGKY IAFVSTEAET DDPESELKPG VDILGAVDEI FYETYDRFIP SHDSAADNCF
401: ISKSYDSTTH FESTVMDVLD MYSKITGKVI DLSVDLSAAS ATAEE
101: FKAVDGSFVY NKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFLYVQDFE ETDPKTHEGM DLNKITAKEF IAKYELEDDT IDFIGHALAL CTDDNYLAQP
201: AMDFIKRVKL YAESLARFQA GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPQCKVEF DDGGKVVGVT SEGETAKCKK VVCDPSYLPD KVQKVGKVAR
301: AICIMSHPIP NTNDSHSAQV ILPQKQLGRK SDMYLFCCSY SHNVAPKGKY IAFVSTEAET DDPESELKPG VDILGAVDEI FYETYDRFIP SHDSAADNCF
401: ISKSYDSTTH FESTVMDVLD MYSKITGKVI DLSVDLSAAS ATAEE
001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN
Arabidopsis Description
Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.