Factsheet for Zm00001d029596_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92083	Sorghum	cytosol	97.32	97.32
Os03t0277000-01	Rice	plasma membrane	94.85	94.85
TraesCS4D01G206900.1	Wheat	cytosol	93.29	93.29
TraesCS4B01G205900.1	Wheat	cytosol, golgi	93.29	93.29
GSMUA_Achr9P03980_001	Banana	cytosol	87.02	87.22
GSMUA_Achr10P...	Banana	cytosol	86.58	86.77
GSMUA_Achr10P...	Banana	cytosol	86.58	86.77
TraesCS4A01G098400.1	Wheat	cytosol	93.29	86.16
KRH42088	Soybean	cytosol	83.89	84.27
KRH49823	Soybean	cytosol, endoplasmic reticulum	83.67	84.04
Bra009390.1-P	Field mustard	cytosol	81.88	82.25
CDY21587	Canola	cytosol	81.88	82.25
CDY56553	Canola	cytosol	81.66	82.02
VIT_03s0017g00490.t01	Wine grape	cytosol	66.89	81.92
CDX81131	Canola	cytosol	81.43	81.8
Bra006026.1-P	Field mustard	cytosol	80.31	81.78
AT5G09550.1	Thale cress	cytosol	81.21	81.57
CDX69899	Canola	cytosol	57.27	81.27
HORVU4Hr1G059240.2	Barley	cytosol	93.74	80.42
Solyc01g105810.2.1	Tomato	cytosol, unclear	79.42	79.78
Zm00001d010255_P001	Maize	cytosol, extracellular	79.19	77.97
Zm00001d010251_P003	Maize	cytosol	79.87	76.28
CDY65664	Canola	cytosol	67.56	73.66
VIT_00s2317g00010.t01	Wine grape	cytosol	23.04	73.05
Zm00001d005498_P001	Maize	cytosol	78.3	70.85
Zm00001d007315_P001	Maize	cytosol	27.74	69.66
Zm00001d038200_P002	Maize	plastid	78.3	68.9
KRH71651	Soybean	cytosol, nucleus, peroxisome	28.41	64.8
Bra028630.1-P	Field mustard	cytosol	80.54	58.73
CDY44805	Canola	cytosol	80.09	56.92
Zm00001d009786_P001	Maize	plastid	42.28	55.1
Zm00001d011867_P001	Maize	cytosol	44.07	53.83
Zm00001d016318_P002	Maize	cytosol	29.98	47.35
KRH66563	Soybean	cytosol	43.4	34.83
Zm00001d004622_P001	Maize	cytosol	5.59	34.72
Zm00001d050984_P001	Maize	cytosol, mitochondrion, peroxisome	5.37	33.33
Zm00001d009201_P001	Maize	cytosol	9.17	24.26
Zm00001d040408_P003	Maize	peroxisome	24.83	20.0
Zm00001d008269_P001	Maize	peroxisome	24.16	19.39
VIT_00s0313g00050.t01	Wine grape	cytosol, nucleus	65.77	15.79

Protein Annotations

Gene3D:1.10.405.10	EntrezGene:100283772	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	UniProt:B6TLN5
EMBL:BT066325	EMBL:EU965900	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092
GO:GO:0005093	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234
GO:GO:0050790	InterPro:IPR036188	ProteinID:ONL99057.1	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892
PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI000182D8E9
EnsemblPlantsGene:Zm00001d029596	EnsemblPlants:Zm00001d029596_P001	EnsemblPlants:Zm00001d029596_T001	:	:	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor

Coordinates

chr1:-:78357846..78361045

Molecular Weight (calculated)

50155.7 Da

IEP (calculated)

5.270

GRAVY (calculated)

-0.362

Length

447 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECIIS GLLSVDGLKV LHMDRNDYYG GESSSLNLTK LWNRFKGNDS PPEHLGVSKE YNVDMVPKFM MANGALVRVL IRTSVTKYLN
101: FKAVDGSFVY NNGKIHKVPA TDVEALKSNL MGLFEKRRAR KFFIYVQDYE EDDPKSHEGL DLNKVTTREV ISKYGLEDDT VDFIGHALAL HRDDSYLDEP
201: AIDTVKRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DESGKAYGVT SEGETAKCKK IVCDPSYLPD KVKKVGRVAR
301: AICIMKHPIP DTKDSHSVQI ILPKKQLKRK SDMYVFCCSY AHNVAPKGKF IAFVSTEAET DKPEIELKPG IDLLGPVEET FFDIYDRYEP VNNPDDDCCF
401: LTNSYDSTTH FETTVKDVLA LYNKITGKEL DLSVDLNAAS ATEQEAA

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.