Factsheet for Zm00001d009786_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001
Zm00001d002122_P007
Zm00001d026425_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT3G59920.1	Zm00001d026425_P003	AT1G14340.1	21798944
AT3G59920.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007315_P001	Maize	cytosol	50.73	97.75
Zm00001d016318_P002	Maize	cytosol	51.02	61.84
Zm00001d011867_P001	Maize	cytosol	63.85	59.84
Os05t0304400-01	Rice	plasma membrane	63.85	49.21
Os05t0418000-01	Rice	cytosol, extracellular, plasma membrane, plastid	62.97	48.54
Zm00001d010251_P003	Maize	cytosol	65.89	48.29
Solyc12g017570.1.1	Tomato	plastid	60.93	47.07
Zm00001d010255_P001	Maize	cytosol, extracellular	62.1	46.92
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	60.35	46.62
Bra004805.1-P	Field mustard	cytosol	60.06	46.4
CDX79782	Canola	cytosol	60.06	46.4
CDY17885	Canola	cytosol	60.06	46.4
KRH59137	Soybean	endoplasmic reticulum	60.06	46.4
VIT_05s0094g01550.t01	Wine grape	cytosol	59.48	45.95
GSMUA_Achr7P23620_001	Banana	cytosol	59.18	45.93
AT2G44100.1	Thale cress	cytosol	59.48	45.84
CDY05962	Canola	cytosol	59.18	45.72
CDX98399	Canola	cytosol	59.18	45.72
PGSC0003DMT400035649	Potato	cytosol	59.18	45.72
Solyc08g015860.2.1	Tomato	extracellular	59.18	45.72
CDX67817	Canola	cytosol	59.18	45.72
Bra003395.1-P	Field mustard	cytosol	59.18	45.72
Zm00001d038200_P002	Maize	plastid	67.64	45.67
Bra007493.1-P	Field mustard	cytosol	59.18	45.62
CDY45775	Canola	cytosol	58.89	45.5
CDX89038	Canola	cytosol	58.89	45.5
Bra014523.1-P	Field mustard	cytosol	58.89	45.5
CDX71860	Canola	cytosol	54.23	45.48
GSMUA_Achr6P18380_001	Banana	cytosol	58.89	45.19
AT3G59920.1	Thale cress	cytosol	58.31	45.05
GSMUA_Achr10P...	Banana	cytosol	55.39	42.79
Zm00001d029596_P001	Maize	cytosol, extracellular	55.1	42.28
Zm00001d005498_P001	Maize	cytosol	58.02	40.28
Zm00001d004622_P001	Maize	cytosol	6.12	29.17
Zm00001d050984_P001	Maize	cytosol, mitochondrion, peroxisome	5.83	27.78
Zm00001d009201_P001	Maize	cytosol	7.0	14.2
Zm00001d040408_P003	Maize	peroxisome	19.53	12.07
Zm00001d008269_P001	Maize	peroxisome	19.53	12.03

Protein Annotations

MapMan:22.8.4.2	Gene3D:3.50.50.60	UniProt:A0A1D6FM08	ProteinID:AQK92702.1	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor
GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005654	GO:GO:0005672	GO:GO:0006139	GO:GO:0006367	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	InterPro:IPR036188	PFAM:PF00996
PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11	InterPro:RabGDI	SUPFAM:SSF51905
SUPFAM:SSF54373	UniParc:UPI0008439370	EnsemblPlantsGene:Zm00001d009786	EnsemblPlants:Zm00001d009786_P001	EnsemblPlants:Zm00001d009786_T001	SEG:seg

Description

Guanosine nucleotide diphosphate dissociation inhibitor 2

Coordinates

chr8:-:81143296..81148339

Molecular Weight (calculated)

37824.9 Da

IEP (calculated)

4.726

GRAVY (calculated)

-0.058

Length

343 amino acids

Sequence
(BLAST)

001: MSRLISSAEV DRFAGGAGSP PSSSSSAQSP VGSTPANCPI IVSLHFPSRS FSCVNLELLQ EHVITALSVE SYYSLAVSTN EQDNVWTFIL TDATFKSAEI
101: QDGKLYLPIV CLYLYVDSLA RFQGGSPYIY PLYGLGELPQ GFARLSAVYG GTYMLNKPDC KVEFDMEGKV CGVTSEGETA KCKKVVCDPS YLQNKVRKIG
201: RVVCAIAIMS HPIPNTNESH SVQIILPQKQ LGRRSDMYVF CCSYTHNVAP RGKFIAFVSV EAETDNPQSE LKPGIDLLGS VDEIFYDIYD RYEPVNEPSL
301: DNCFVSTSYD ATTHFETTVT DVLNMYTMTT GKVTWTSSFY LLE

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.