Factsheet for Zm00001d011867_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001
Zm00001d002122_P007
Zm00001d026425_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT3G59920.1	Zm00001d026425_P003	AT1G14340.1	21798944
AT3G59920.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007315_P001	Maize	cytosol	42.62	87.64
Zm00001d009786_P001	Maize	plastid	59.84	63.85
Os05t0304400-01	Rice	plasma membrane	62.02	51.01
Os05t0418000-01	Rice	cytosol, extracellular, plasma membrane, plastid	61.48	50.56
Zm00001d010251_P003	Maize	cytosol	63.93	50.0
Zm00001d016318_P002	Maize	cytosol	38.25	49.47
Zm00001d010255_P001	Maize	cytosol, extracellular	61.2	49.34
Solyc12g017570.1.1	Tomato	plastid	59.29	48.87
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	58.74	48.42
KRH59137	Soybean	endoplasmic reticulum	58.2	47.97
Zm00001d038200_P002	Maize	plastid	66.39	47.83
Solyc08g015860.2.1	Tomato	extracellular	57.65	47.52
PGSC0003DMT400035649	Potato	cytosol	57.65	47.52
GSMUA_Achr7P23620_001	Banana	cytosol	57.1	47.29
VIT_05s0094g01550.t01	Wine grape	cytosol	57.1	47.07
AT3G59920.1	Thale cress	cytosol	56.83	46.85
CDY45775	Canola	cytosol	56.83	46.85
CDY05962	Canola	cytosol	56.83	46.85
GSMUA_Achr6P18380_001	Banana	cytosol	57.1	46.76
Bra007493.1-P	Field mustard	cytosol	56.83	46.74
CDY17885	Canola	cytosol	56.56	46.62
CDX98399	Canola	cytosol	56.56	46.62
CDX89038	Canola	cytosol	56.56	46.62
CDX79782	Canola	cytosol	56.56	46.62
CDX67817	Canola	cytosol	56.56	46.62
Bra003395.1-P	Field mustard	cytosol	56.56	46.62
Bra004805.1-P	Field mustard	cytosol	56.56	46.62
Bra014523.1-P	Field mustard	cytosol	56.56	46.62
AT2G44100.1	Thale cress	cytosol	56.28	46.29
CDX71860	Canola	cytosol	51.64	46.21
Zm00001d029596_P001	Maize	cytosol, extracellular	53.83	44.07
GSMUA_Achr10P...	Banana	cytosol	53.01	43.69
Zm00001d005498_P001	Maize	cytosol	56.01	41.5
Zm00001d004622_P001	Maize	cytosol	5.74	29.17
Zm00001d050984_P001	Maize	cytosol, mitochondrion, peroxisome	5.46	27.78
Zm00001d009201_P001	Maize	cytosol	7.65	16.57
Zm00001d008269_P001	Maize	peroxisome	15.85	10.41
Zm00001d040408_P003	Maize	peroxisome	15.57	10.27

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	UniProt:A0A1D6G4K1	ProteinID:AQK98215.1	InterPro:FAD/NAD-bd_sf
InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0030234
GO:GO:0050790	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11
SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI0008435C07	EnsemblPlantsGene:Zm00001d011867	EnsemblPlants:Zm00001d011867_P001	EnsemblPlants:Zm00001d011867_T001

Description

Guanosine nucleotide diphosphate dissociation inhibitor 2

Coordinates

chr8:+:163259232..163261757

Molecular Weight (calculated)

41160.3 Da

IEP (calculated)

6.313

GRAVY (calculated)

-0.160

Length

366 amino acids

Sequence
(BLAST)

001: MAVEEEAEED ALSGIVLRKY VKQRLLGGFT AQRTTAMGRR KTAITRFVLQ EGTDKVFINF HDAKVPINPR IARTYYTNVA PLCCLGRIAI GNSMFHVYFR
101: KYGLSDDTVD FVGHALALHR DDRYLDEPAL DTVNRIKLYA DSLARFQGGS PYIYPLYGLG ELPQGFARLS AVYGGTYMLN KPDCKVEFDM EGKVCGVTSE
201: GENAKCKKVV CDPSYLQNKV RKIGRVVRAI AIMSHPIPNT NESHSITMLD TVMIFLSLSR YVFCCSYTHN VAPRGKLNIF VSAEAETDNP QSELKPGIDL
301: LGSVDEIFYD IYDRYEPVNE PSLDNCFVST SYDATTHFET TVTDVLNMYT MITGKVTWTS SFYLLE

Best Arabidopsis Sequence Match ( AT1G74970.1 )
(BLAST)

001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR

Arabidopsis Description

RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.