Factsheet for Zm00001d005498_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001
Zm00001d002122_P007
Zm00001d026425_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT3G59920.1	Zm00001d026425_P003	AT1G14340.1	21798944
AT3G59920.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98346	Sorghum	cytosol	87.25	96.64
TraesCS5B01G042400.1	Wheat	cytosol	84.21	93.48
TraesCS5A01G041100.1	Wheat	cytosol	84.01	93.26
TraesCS5D01G048100.1	Wheat	cytosol	83.81	93.03
Os07t0271000-01	Rice	plasma membrane	83.81	92.83
GSMUA_Achr7P23620_001	Banana	cytosol	76.32	85.29
Zm00001d010255_P001	Maize	cytosol, extracellular	76.72	83.48
PGSC0003DMT400035649	Potato	cytosol	74.9	83.33
VIT_05s0094g01550.t01	Wine grape	cytosol	74.49	82.88
Solyc08g015860.2.1	Tomato	extracellular	74.49	82.88
KRH59137	Soybean	endoplasmic reticulum	74.49	82.88
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	74.29	82.66
Solyc12g017570.1.1	Tomato	plastid	73.89	82.21
GSMUA_Achr6P18380_001	Banana	cytosol	74.29	82.1
CDX98399	Canola	cytosol	73.68	81.98
CDX67817	Canola	cytosol	73.68	81.98
CDX79782	Canola	cytosol	73.48	81.76
CDY17885	Canola	cytosol	73.48	81.76
Bra004805.1-P	Field mustard	cytosol	73.48	81.76
Bra003395.1-P	Field mustard	cytosol	73.48	81.76
Zm00001d010251_P003	Maize	cytosol	77.33	81.62
AT2G44100.1	Thale cress	cytosol	72.67	80.67
AT3G59920.1	Thale cress	cytosol	72.47	80.63
CDX89038	Canola	cytosol	72.47	80.63
Bra014523.1-P	Field mustard	cytosol	72.47	80.63
Bra007493.1-P	Field mustard	cytosol	72.47	80.45
CDY45775	Canola	cytosol	72.27	80.41
CDY05962	Canola	cytosol	72.06	80.18
CDX71860	Canola	cytosol	65.59	79.22
Zm00001d029596_P001	Maize	cytosol, extracellular	70.85	78.3
Zm00001d007315_P001	Maize	cytosol	28.14	78.09
HORVU5Hr1G009840.1	Barley	cytosol	84.62	76.56
GSMUA_Achr10P...	Banana	cytosol	68.62	76.35
Zm00001d038200_P002	Maize	plastid	75.91	73.82
Zm00001d009786_P001	Maize	plastid	40.28	58.02
Zm00001d011867_P001	Maize	cytosol	41.5	56.01
Zm00001d016318_P002	Maize	cytosol	29.76	51.94
Zm00001d004622_P001	Maize	cytosol	5.06	34.72
Zm00001d050984_P001	Maize	cytosol, mitochondrion, peroxisome	4.86	33.33
Zm00001d009201_P001	Maize	cytosol	7.69	22.49
Zm00001d040408_P003	Maize	peroxisome	21.66	19.28
Zm00001d008269_P001	Maize	peroxisome	21.26	18.85

Protein Annotations

Gene3D:1.10.405.10	EntrezGene:100273017	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	UniProt:A0A1D6ENE6
InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	InterPro:IPR036188
ProteinID:ONM21326.1	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11
InterPro:RabGDI	SUPFAM:SSF51905	UniParc:UPI0008425796	EnsemblPlantsGene:Zm00001d005498	EnsemblPlants:Zm00001d005498_P001	EnsemblPlants:Zm00001d005498_T001
SEG:seg	:	:	:	:	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor 2

Coordinates

chr2:-:175999839..176006292

Molecular Weight (calculated)

55327.2 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.221

Length

494 amino acids

Sequence
(BLAST)

001: MDVEYDVIVL GTGLKECILS GLLSVDRLKV LHMDRNDYYG GDSTSLNLNQ LWKRFKGEET PPAHIGASRD YNVDMVPKFM MANGTLVRVL IHTGVTKYMS
101: FKAVDGSYVF NKGKIHKVPS TDMEALKSPL MGLFEKRRAG KFFLYVQDYK ENDPSTHKGY NLTKLTTKEL ISWDSVYSNS YVLISFFRKY GLDDNTIDFI
201: GHAVALHRDD SYLTEPAIDT VKRMKASLYS DILKISQHNS KLYAESVARF QGGSPYIYPL YGLGELPQGF ARLSAVYGGT YMLSKPECKV EFDDEGKVCG
301: VTSEGETAKC KKVVCDPSYL PDKVKKIGKV FRAIAIMSHP IPNTAESHSV QIILPQKQLG RRSDMQVFLI SSPRFIHYLL VYVFCCSYSH NVASKGKFIA
401: FVSAQAETDN PEKELKPGID LLGKVDELFI DIYDRYEPTN DSSADNCFIS TSYDATTHFE STVMDVLSLY TKITGKTVDL SVDLSAASAA EDDM

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.