Factsheet for Zm00001d010251_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001
Zm00001d002122_P007
Zm00001d026425_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT3G59920.1	Zm00001d026425_P003	AT1G14340.1	21798944
AT3G59920.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18242	Sorghum	cytosol	93.38	98.2
Os05t0304400-01	Rice	plasma membrane	89.32	93.93
Os05t0418000-01	Rice	cytosol, extracellular, plasma membrane, plastid	89.32	93.93
Zm00001d010255_P001	Maize	cytosol, extracellular	88.46	91.19
Zm00001d007315_P001	Maize	cytosol	34.62	91.01
GSMUA_Achr7P23620_001	Banana	cytosol	83.76	88.69
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	82.69	87.16
KRH59137	Soybean	endoplasmic reticulum	82.48	86.94
Solyc12g017570.1.1	Tomato	plastid	82.27	86.71
PGSC0003DMT400035649	Potato	cytosol	81.62	86.04
VIT_05s0094g01550.t01	Wine grape	cytosol	81.41	85.81
Solyc08g015860.2.1	Tomato	extracellular	81.41	85.81
GSMUA_Achr6P18380_001	Banana	cytosol	81.62	85.46
Zm00001d038200_P002	Maize	plastid	92.09	84.84
CDY17885	Canola	cytosol	79.91	84.23
CDX98399	Canola	cytosol	79.91	84.23
CDX79782	Canola	cytosol	79.91	84.23
CDX67817	Canola	cytosol	79.91	84.23
Bra004805.1-P	Field mustard	cytosol	79.91	84.23
AT3G59920.1	Thale cress	cytosol	79.7	84.01
CDY45775	Canola	cytosol	79.7	84.01
Bra003395.1-P	Field mustard	cytosol	79.7	84.01
CDX89038	Canola	cytosol	79.49	83.78
Bra014523.1-P	Field mustard	cytosol	79.49	83.78
AT2G44100.1	Thale cress	cytosol	79.49	83.6
Bra007493.1-P	Field mustard	cytosol	78.42	82.47
CDY05962	Canola	cytosol	77.78	81.98
CDX71860	Canola	cytosol	71.15	81.42
Zm00001d029596_P001	Maize	cytosol, extracellular	76.28	79.87
GSMUA_Achr10P...	Banana	cytosol	74.79	78.83
Zm00001d005498_P001	Maize	cytosol	81.62	77.33
Zm00001d009786_P001	Maize	plastid	48.29	65.89
Zm00001d011867_P001	Maize	cytosol	50.0	63.93
Zm00001d016318_P002	Maize	cytosol	33.55	55.48
Zm00001d004622_P001	Maize	cytosol	5.13	33.33
Zm00001d050984_P001	Maize	cytosol, mitochondrion, peroxisome	4.91	31.94
Zm00001d009201_P001	Maize	cytosol	8.55	23.67
Zm00001d040408_P003	Maize	peroxisome	22.44	18.92
Zm00001d008269_P001	Maize	peroxisome	22.22	18.67

Protein Annotations

Gene3D:1.10.405.10	EntrezGene:100501867	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	UniProt:A0A1D6FQ35
ProteinID:AQK93743.1	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790
InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11
InterPro:RabGDI	SUPFAM:SSF51905	UniParc:UPI00084553DD	EnsemblPlantsGene:Zm00001d010251	EnsemblPlants:Zm00001d010251_P003	EnsemblPlants:Zm00001d010251_T003
SEG:seg	:	:	:	:	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor 2

Coordinates

chr8:-:106127323..106136257

Molecular Weight (calculated)

52317.7 Da

IEP (calculated)

5.495

GRAVY (calculated)

-0.208

Length

468 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GDSTSLNLNQ LWKRFRGEDK PPAHLGASRD YNVDMVPKFM MANGTLVRTL IHTDVTKYLS
101: FKAVDGSYVF SKGKIYKVPA TDMEALKSPL MGLFEKRRAR NFFIYVQDYN EADPRTHQGL DLTRVTTREL IALAPLCLKY GLSDDTVDFI GHALALHRDD
201: RYLDEPALDT VKRMKVSLGQ SCFLVVTMDK LVLPNESLAR FQGGSPYIYP LYGLGELPQG FARLSAVYGG TYMLNKPECK VEFDMEGKVC GVTSEGETAK
301: CKKVVCDPSY LPNKVRKIGR VVRAIAIMSH PIPNTNESHS VQIILPQKQL GRRSDMYVFC CSYTHNVAPR GKFIAFVSAE AETDNPQSEL KPGIDLLGSV
401: DEILYDIYDR YEPVNEPSLD NCFVTTSYDA TTHFETTVTD VLNMYTMITG KTVDLSVDLS AASAAEEY

Best Arabidopsis Sequence Match ( AT3G59920.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGVKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APEHLGASRD YNVDMMPKFM MGNGKLVRTL IHTDVTKYLS
101: FKAVDGSYVF VKGKVQKVPA TPMEALKSSL MGIFEKRRAG KFFSFVQEYD EKDPKTHDGM DLTRVTTKEL IAKYGLDGNT IDFIGHAVAL HTNDQHLDQP
201: AFDTVMRMKL YAESLARFQG TSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEGGKVIGVT SEGETAKCKK IVCDPSYLPN KVRKIGRVAR
301: AIAIMSHPIP NTNDSHSVQV IIPQKQLARK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELKPG TDLLGPVDEI FFDMYDRYEP VNEPELDNCF
401: ISTSYDATTH FETTVADVLN MYTLITGKQL DLSVDLSAAS AAEE

Arabidopsis Description

GDI2Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178VFJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.