Factsheet for Zm00001d016318_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001
Zm00001d002122_P007
Zm00001d026425_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT3G59920.1	Zm00001d026425_P003	AT1G14340.1	21798944
AT3G59920.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007315_P001	Maize	cytosol	34.98	55.62
Zm00001d009786_P001	Maize	plastid	61.84	51.02
Zm00001d011867_P001	Maize	cytosol	49.47	38.25
Os05t0418000-01	Rice	cytosol, extracellular, plasma membrane, plastid	54.42	34.61
Os05t0304400-01	Rice	plasma membrane	54.42	34.61
Bra004805.1-P	Field mustard	cytosol	53.36	34.01
CDX79782	Canola	cytosol	53.36	34.01
CDY17885	Canola	cytosol	53.36	34.01
Solyc12g017570.1.1	Tomato	plastid	53.0	33.78
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	53.0	33.78
AT2G44100.1	Thale cress	cytosol	53.0	33.71
KRH59137	Soybean	endoplasmic reticulum	52.65	33.56
Zm00001d010251_P003	Maize	cytosol	55.48	33.55
PGSC0003DMT400035649	Potato	cytosol	52.3	33.33
Solyc08g015860.2.1	Tomato	extracellular	52.3	33.33
CDX98399	Canola	cytosol	51.59	32.88
CDY45775	Canola	cytosol	51.59	32.88
CDX89038	Canola	cytosol	51.59	32.88
CDX67817	Canola	cytosol	51.59	32.88
Bra014523.1-P	Field mustard	cytosol	51.59	32.88
VIT_05s0094g01550.t01	Wine grape	cytosol	51.59	32.88
Bra003395.1-P	Field mustard	cytosol	51.59	32.88
Zm00001d010255_P001	Maize	cytosol, extracellular	52.65	32.82
Bra007493.1-P	Field mustard	cytosol	51.59	32.81
CDY05962	Canola	cytosol	51.24	32.66
GSMUA_Achr7P23620_001	Banana	cytosol	50.88	32.58
AT3G59920.1	Thale cress	cytosol	50.53	32.21
Zm00001d038200_P002	Maize	plastid	57.6	32.09
CDX71860	Canola	cytosol	45.94	31.78
GSMUA_Achr6P18380_001	Banana	cytosol	50.18	31.77
GSMUA_Achr10P...	Banana	cytosol	48.06	30.63
Zm00001d029596_P001	Maize	cytosol, extracellular	47.35	29.98
Zm00001d005498_P001	Maize	cytosol	51.94	29.76
Zm00001d004622_P001	Maize	cytosol	7.42	29.17
Zm00001d050984_P001	Maize	cytosol, mitochondrion, peroxisome	7.07	27.78
Zm00001d009201_P001	Maize	cytosol	8.48	14.2
Zm00001d008269_P001	Maize	peroxisome	23.67	12.03
Zm00001d040408_P003	Maize	peroxisome	22.97	11.71

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	UniProt:A0A1D6H6Q9	ProteinID:AQK70474.1
InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	InterPro:IPR036188
PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11	InterPro:RabGDI
SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI0008426EF5	EnsemblPlantsGene:Zm00001d016318	EnsemblPlants:Zm00001d016318_P002	EnsemblPlants:Zm00001d016318_T002
SEG:seg	:	:	:	:	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor 2

Coordinates

chr5:-:156952617..156960692

Molecular Weight (calculated)

31584.8 Da

IEP (calculated)

7.757

GRAVY (calculated)

-0.156

Length

283 amino acids

Sequence
(BLAST)

001: MSRSISSAEV DRFAGGAGSP PSSSSSAQSP VRSTPVSVVL IWSCCRSTSS RHFQWRATTV QLYLPIVCLY LYAHSLARFQ GGSPYIYPLY GLGELPQGFA
101: RLSAVYGGTY MLNKPDCKVE FDMEGKVCGV TSEGETAKCK KVVCDPSYLQ NKVRKIGRVV RAIAIMSHPI PNTNESHSVQ IILPQKQLGR RSNIYDISVG
201: ILFLDEIFYD IYDRYEPVNE PSLDNCFVST LNLNHHIIGE LLELSENEVP PEDIVFHRFY LNKTGPVKHK AKWKDSVLDE GIV

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.