Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d000055_P001 | |
| Zm00001d002122_P007 | |
| Zm00001d026425_P003 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G59920.1 | Zm00001d002122_P007 | AT1G14340.1 | 21798944 |
| AT3G59920.1 | Zm00001d026425_P003 | AT1G14340.1 | 21798944 |
| AT3G59920.1 | Zm00001d000055_P001 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009786_P001 | Maize | plastid | 97.75 | 50.73 |
| Zm00001d011867_P001 | Maize | cytosol | 87.64 | 42.62 |
| Zm00001d016318_P002 | Maize | cytosol | 55.62 | 34.98 |
| Zm00001d010251_P003 | Maize | cytosol | 91.01 | 34.62 |
| Os05t0304400-01 | Rice | plasma membrane | 85.39 | 34.16 |
| Os05t0418000-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 84.27 | 33.71 |
| Zm00001d010255_P001 | Maize | cytosol, extracellular | 83.71 | 32.82 |
| Zm00001d038200_P002 | Maize | plastid | 92.7 | 32.48 |
| Bra004805.1-P | Field mustard | cytosol | 80.9 | 32.43 |
| CDX79782 | Canola | cytosol | 80.9 | 32.43 |
| Solyc12g017570.1.1 | Tomato | plastid | 80.9 | 32.43 |
| CDY17885 | Canola | cytosol | 80.9 | 32.43 |
| KRH43030 | Soybean | cytosol, endoplasmic reticulum, nucleus | 80.34 | 32.21 |
| KRH59137 | Soybean | endoplasmic reticulum | 79.78 | 31.98 |
| CDX98399 | Canola | cytosol | 79.78 | 31.98 |
| CDX67817 | Canola | cytosol | 79.78 | 31.98 |
| Bra003395.1-P | Field mustard | cytosol | 79.78 | 31.98 |
| AT2G44100.1 | Thale cress | cytosol | 79.78 | 31.91 |
| AT3G59920.1 | Thale cress | cytosol | 79.21 | 31.76 |
| Bra014523.1-P | Field mustard | cytosol | 79.21 | 31.76 |
| CDX89038 | Canola | cytosol | 79.21 | 31.76 |
| CDY05962 | Canola | cytosol | 79.21 | 31.76 |
| CDY45775 | Canola | cytosol | 79.21 | 31.76 |
| Bra007493.1-P | Field mustard | cytosol | 79.21 | 31.69 |
| VIT_05s0094g01550.t01 | Wine grape | cytosol | 78.65 | 31.53 |
| GSMUA_Achr7P23620_001 | Banana | cytosol | 78.09 | 31.45 |
| PGSC0003DMT400035649 | Potato | cytosol | 78.09 | 31.31 |
| Solyc08g015860.2.1 | Tomato | extracellular | 77.53 | 31.08 |
| GSMUA_Achr6P18380_001 | Banana | cytosol | 77.53 | 30.87 |
| CDX71860 | Canola | cytosol | 69.66 | 30.32 |
| GSMUA_Achr10P... | Banana | cytosol | 72.47 | 29.05 |
| Zm00001d005498_P001 | Maize | cytosol | 78.09 | 28.14 |
| Zm00001d029596_P001 | Maize | cytosol, extracellular | 69.66 | 27.74 |
| Zm00001d040408_P003 | Maize | peroxisome | 15.17 | 4.86 |
| Zm00001d008269_P001 | Maize | peroxisome | 15.17 | 4.85 |
| Zm00001d050984_P001 | Maize | cytosol, mitochondrion, peroxisome | 0.0 | 0.0 |
| Zm00001d009201_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d004622_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:22.8.4.2 | Gene3D:3.30.519.10 | UniProt:A0A1D6F5G6 | InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor | GO:GO:0003674 |
| GO:GO:0005092 | GO:GO:0005093 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0030234 | GO:GO:0050790 | InterPro:IPR036188 | ProteinID:ONM26531.1 | PFAM:PF00996 | PRINTS:PR00892 |
| PANTHER:PTHR11787 | PANTHER:PTHR11787:SF11 | InterPro:RabGDI | SUPFAM:SSF51905 | SUPFAM:SSF54373 | UniParc:UPI000844C4EA |
| EnsemblPlantsGene:Zm00001d007315 | EnsemblPlants:Zm00001d007315_P001 | EnsemblPlants:Zm00001d007315_T001 | : | : | : |
Description
Guanosine nucleotide diphosphate dissociation inhibitor 2
Coordinates
chr2:-:227631091..227632335
Molecular Weight (calculated)
19976.8 Da
IEP (calculated)
5.998
GRAVY (calculated)
-0.228
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKVCGVTS EGETAKCKKV VCDPSYLQNK VRKIGRVVHA IAIMSHPIPN TNESHSVQII LPQKQLGRRS DMYVFCCSYT HNVAPRGKFI AFVSAEAETD
101: NPQSKLKPGI DLLGSVDEIF YDIYDRYEPV NEPSLDNCFV STSYDATTHF ETTVTDVLNM YTMITGKVTW TSSFYLLE
101: NPQSKLKPGI DLLGSVDEIF YDIYDRYEPV NEPSLDNCFV STSYDATTHF ETTVTDVLNM YTMITGKVTW TSSFYLLE
001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
Arabidopsis Description
GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.