Factsheet for HORVU5Hr1G009840.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G115210.1
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	HORVU2Hr1G115210.1	AT1G14340.1	21798944
AT3G59920.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G041100.1	Wheat	cytosol	80.04	98.2
TraesCS5D01G048100.1	Wheat	cytosol	79.85	97.98
TraesCS5B01G042400.1	Wheat	cytosol	79.85	97.98
Os07t0271000-01	Rice	plasma membrane	76.37	93.5
EER98346	Sorghum	cytosol	76.01	93.05
GSMUA_Achr7P23620_001	Banana	cytosol	68.86	85.07
Zm00001d005498_P001	Maize	cytosol	76.56	84.62
HORVU1Hr1G064490.8	Barley	cytosol	67.95	83.0
PGSC0003DMT400035649	Potato	cytosol	67.4	82.88
KRH59137	Soybean	endoplasmic reticulum	67.22	82.66
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	67.03	82.43
Solyc08g015860.2.1	Tomato	extracellular	67.03	82.43
Solyc12g017570.1.1	Tomato	plastid	66.67	81.98
VIT_05s0094g01550.t01	Wine grape	cytosol	66.67	81.98
GSMUA_Achr6P18380_001	Banana	cytosol	67.03	81.88
CDX98399	Canola	cytosol	65.93	81.08
CDX67817	Canola	cytosol	65.93	81.08
Bra003395.1-P	Field mustard	cytosol	65.75	80.86
CDY17885	Canola	cytosol	65.38	80.41
CDX79782	Canola	cytosol	65.38	80.41
Bra004805.1-P	Field mustard	cytosol	65.38	80.41
AT3G59920.1	Thale cress	cytosol	65.02	79.95
CDX89038	Canola	cytosol	65.02	79.95
Bra014523.1-P	Field mustard	cytosol	65.02	79.95
Bra007493.1-P	Field mustard	cytosol	65.02	79.78
CDY45775	Canola	cytosol	64.84	79.73
AT2G44100.1	Thale cress	cytosol	64.84	79.55
CDY05962	Canola	cytosol	64.65	79.5
CDX71860	Canola	cytosol	58.61	78.24
HORVU1Hr1G064480.1	Barley	cytosol	62.82	76.91
GSMUA_Achr10P...	Banana	cytosol	62.27	76.58
HORVU4Hr1G059240.2	Barley	cytosol	64.84	67.95
HORVU7Hr1G075170.1	Barley	mitochondrion	9.89	49.09
HORVU2Hr1G104740.2	Barley	mitochondrion	8.42	48.94
HORVU4Hr1G059230.1	Barley	cytosol	6.04	46.48
HORVU3Hr1G038200.3	Barley	cytosol, nucleus, peroxisome	18.5	18.0

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	UniProt:A0A287QB75	InterPro:FAD/NAD-bd_sf
InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:HORVU5Hr1G009840	EnsemblPlants:HORVU5Hr1G009840.1
InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11
InterPro:RabGDI	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI000B48582D	SEG:seg	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A287QB75]

Coordinates

chrchr5H:+:24448979..24459396

Molecular Weight (calculated)

60591.3 Da

IEP (calculated)

7.975

GRAVY (calculated)

-0.347

Length

546 amino acids

Sequence
(BLAST)

001: LDPCFQITQP LVGWVVALNS HWLDERNARQ RKSKPQHRDQ TCGPESPPRP IFLRGLVVPS PRRRTRGVGD PSHHITSHIT RGLVVPSLAR SSLNRDGARS
101: TMDVEYDVIV LGTGLKECIL SGLLSVDRLK VLHMDRNDYY GGDSTSLNLN QLWKRFKGDG TPPANIGASR DYNVDMVPKF MMANGALVRV LIHTGVTKYL
201: SFKAVDGSYV FNKGKIHKVP STDMEALKSP LMGLFEKRRA GKFFLYVQDY KENDPSTHKG LDLTKMTSKQ LISKYGLDDN TIDFIGHAVA LHKDDSYLSE
301: PAIEIVKRMK LYAESVARFQ GGSPYIYPLY GLGELPQGFA RLSAVYGGTY MLNKPECKVE FDDEGKVRGV TSEGETAKCK KVVCDPSYVP DKVKKVGKVF
401: RAIAIMSHPI PNTAESHSVQ IIIPQKQLGR RSDMYVFCCS YSHNVASKGK FIAFVSAQAE SDNPEAELKP GIDLLGPVDE LFFDTYDRYE PANDPSSDNC
501: FISTSYDATT HFESTVMDVL SLYTKITGKT VDLSVDLSAA SAAEDD

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.