Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G115210.1 | |
| HORVU3Hr1G018030.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G59920.1 | HORVU2Hr1G115210.1 | AT1G14340.1 | 21798944 |
| AT3G59920.1 | HORVU3Hr1G018030.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G075170.1 | Barley | mitochondrion | 90.43 | 77.27 |
| HORVU1Hr1G064490.8 | Barley | cytosol | 56.38 | 11.86 |
| CDX71860 | Canola | cytosol | 51.06 | 11.74 |
| Os05t0418000-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 55.32 | 11.69 |
| HORVU4Hr1G059230.1 | Barley | cytosol | 8.51 | 11.27 |
| Bra004805.1-P | Field mustard | cytosol | 53.19 | 11.26 |
| Bra014523.1-P | Field mustard | cytosol | 53.19 | 11.26 |
| CDX79782 | Canola | cytosol | 53.19 | 11.26 |
| CDX89038 | Canola | cytosol | 53.19 | 11.26 |
| CDY45775 | Canola | cytosol | 53.19 | 11.26 |
| CDY17885 | Canola | cytosol | 53.19 | 11.26 |
| Os05t0304400-01 | Rice | plasma membrane | 53.19 | 11.24 |
| AT3G59920.1 | Thale cress | cytosol | 52.13 | 11.04 |
| CDX98399 | Canola | cytosol | 52.13 | 11.04 |
| CDX67817 | Canola | cytosol | 52.13 | 11.04 |
| AT2G44100.1 | Thale cress | cytosol | 52.13 | 11.01 |
| GSMUA_Achr7P23620_001 | Banana | cytosol | 51.06 | 10.86 |
| CDY05962 | Canola | cytosol | 51.06 | 10.81 |
| KRH43030 | Soybean | cytosol, endoplasmic reticulum, nucleus | 51.06 | 10.81 |
| Bra003395.1-P | Field mustard | cytosol | 51.06 | 10.81 |
| Solyc12g017570.1.1 | Tomato | plastid | 51.06 | 10.81 |
| KRH59137 | Soybean | endoplasmic reticulum | 50.0 | 10.59 |
| PGSC0003DMT400035649 | Potato | cytosol | 50.0 | 10.59 |
| Solyc08g015860.2.1 | Tomato | extracellular | 50.0 | 10.59 |
| Bra007493.1-P | Field mustard | cytosol | 50.0 | 10.56 |
| HORVU1Hr1G064480.1 | Barley | cytosol | 50.0 | 10.54 |
| VIT_05s0094g01550.t01 | Wine grape | cytosol | 47.87 | 10.14 |
| GSMUA_Achr6P18380_001 | Banana | cytosol | 44.68 | 9.4 |
| GSMUA_Achr10P... | Banana | cytosol | 40.43 | 8.56 |
| HORVU5Hr1G009840.1 | Barley | cytosol | 48.94 | 8.42 |
| HORVU4Hr1G059240.2 | Barley | cytosol | 44.68 | 8.06 |
| HORVU3Hr1G038200.3 | Barley | cytosol, nucleus, peroxisome | 18.09 | 3.03 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | UniProt:A0A287JAM5 | InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor | GO:GO:0003674 |
| GO:GO:0005092 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:HORVU2Hr1G104740 |
| EnsemblPlants:HORVU2Hr1G104740.2 | InterPro:IPR036188 | PFAM:PF00996 | PRINTS:PR00891 | PANTHER:PTHR11787 | PANTHER:PTHR11787:SF11 |
| UniParc:UPI000B47C163 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:704437158..704438328
Molecular Weight (calculated)
10872.9 Da
IEP (calculated)
10.008
GRAVY (calculated)
-0.844
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MLDPEWARPR RRSAAGTGLD PVSIRFRERC QIPSPLTKVL HMDRNDYYGG HSTSLNLNQL WKKFRGEDKP PAHLGASRDY NVDMVPKVWH APFD
001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKVM F
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKVM F
Arabidopsis Description
GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.