Factsheet for HORVU1Hr1G064490.8

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G115210.1
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	HORVU2Hr1G115210.1	AT1G14340.1	21798944
AT3G59920.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G260900.1	Wheat	cytosol, golgi	98.21	98.65
TraesCS1B01G271700.1	Wheat	cytosol	98.21	98.65
TraesCS1A01G260900.1	Wheat	cytosol	98.21	98.65
KXG22017	Sorghum	cytosol	94.63	95.06
Zm00001d010255_P001	Maize	cytosol, extracellular	94.18	92.73
GSMUA_Achr7P23620_001	Banana	cytosol	89.26	90.27
Solyc12g017570.1.1	Tomato	plastid	87.92	88.51
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	87.7	88.29
KRH59137	Soybean	endoplasmic reticulum	87.47	88.06
HORVU1Hr1G064480.1	Barley	cytosol	86.35	86.55
CDX98399	Canola	cytosol	85.91	86.49
CDX67817	Canola	cytosol	85.91	86.49
PGSC0003DMT400035649	Potato	cytosol	85.91	86.49
GSMUA_Achr6P18380_001	Banana	cytosol	86.35	86.35
Bra003395.1-P	Field mustard	cytosol	85.68	86.26
Solyc08g015860.2.1	Tomato	extracellular	85.68	86.26
Bra004805.1-P	Field mustard	cytosol	85.46	86.04
CDX79782	Canola	cytosol	85.46	86.04
CDY17885	Canola	cytosol	85.46	86.04
AT2G44100.1	Thale cress	cytosol	85.46	85.84
CDX89038	Canola	cytosol	85.23	85.81
VIT_05s0094g01550.t01	Wine grape	cytosol	85.23	85.81
Bra014523.1-P	Field mustard	cytosol	85.23	85.81
CDY45775	Canola	cytosol	85.01	85.59
AT3G59920.1	Thale cress	cytosol	85.01	85.59
Bra007493.1-P	Field mustard	cytosol	84.34	84.72
CDY05962	Canola	cytosol	83.67	84.23
CDX71860	Canola	cytosol	76.29	83.37
GSMUA_Achr10P...	Banana	cytosol	79.64	80.18
HORVU4Hr1G059240.2	Barley	cytosol	79.87	68.52
HORVU5Hr1G009840.1	Barley	cytosol	83.0	67.95
HORVU2Hr1G104740.2	Barley	mitochondrion	11.86	56.38
HORVU7Hr1G075170.1	Barley	mitochondrion	13.65	55.45
HORVU4Hr1G059230.1	Barley	cytosol	8.28	52.11
HORVU3Hr1G038200.3	Barley	cytosol, nucleus, peroxisome	22.37	17.83

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	UniProt:A0A287FZ57	InterPro:FAD/NAD-bd_sf
InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:HORVU1Hr1G064490	EnsemblPlants:HORVU1Hr1G064490.8
InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11
InterPro:RabGDI	SUPFAM:SSF51905	UniParc:UPI000B4790D3	SEG:seg	:	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A287FZ57]

Coordinates

chrchr1H:-:461593180..461598264

Molecular Weight (calculated)

49720.4 Da

IEP (calculated)

5.949

GRAVY (calculated)

-0.277

Length

447 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GDSTSLNLNQ LWKKFRGEDK PPAHLGASRD YNVDMVPKFM MANGTLVRTL IHTDVTKYLS
101: FKAVDGSYVF SKGKIHKVPA TDMEALKSPL MGIFEKRRAR NFFIYVQDYN DADPKTHQGL DLTRMTTREL IAKHGLSDDT IDFIGHALAL HRDDRYLSEP
201: ALDTVKRMKL YSESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DMEGKVCGVT SEGETAKCKK VVCDPSYLAN KVRKIGKVAR
301: AIAIMSHPIP NANDSHSVQI ILPQKQLGRK SDMYVFCCSY THNVAPKGKF IAFVSAEAET DNPQSELKPG IDLLGPVDEL FFDMYDRYEP VNEPSLDNCF
401: VSSSYDATTH FETTVTDVLN MYTLITGKTV DLSVDLSAAS AAEESSG

Best Arabidopsis Sequence Match ( AT3G59920.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGVKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APEHLGASRD YNVDMMPKFM MGNGKLVRTL IHTDVTKYLS
101: FKAVDGSYVF VKGKVQKVPA TPMEALKSSL MGIFEKRRAG KFFSFVQEYD EKDPKTHDGM DLTRVTTKEL IAKYGLDGNT IDFIGHAVAL HTNDQHLDQP
201: AFDTVMRMKL YAESLARFQG TSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEGGKVIGVT SEGETAKCKK IVCDPSYLPN KVRKIGRVAR
301: AIAIMSHPIP NTNDSHSVQV IIPQKQLARK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELKPG TDLLGPVDEI FFDMYDRYEP VNEPELDNCF
401: ISTSYDATTH FETTVADVLN MYTLITGKQL DLSVDLSAAS AAEE

Arabidopsis Description

GDI2Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178VFJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.