Factsheet for HORVU4Hr1G059230.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
iPSORT:	secretory
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P02920_001	Banana	cytosol	39.44	27.45
KRH71651	Soybean	cytosol, nucleus, peroxisome	29.58	10.71
HORVU2Hr1G104740.2	Barley	mitochondrion	11.27	8.51
HORVU1Hr1G064490.8	Barley	cytosol	52.11	8.28
HORVU7Hr1G075170.1	Barley	mitochondrion	12.68	8.18
Solyc01g105810.2.1	Tomato	cytosol, unclear	50.7	8.09
Bra006026.1-P	Field mustard	cytosol	49.3	7.97
CDY56553	Canola	cytosol	49.3	7.87
CDY21587	Canola	cytosol	49.3	7.87
CDX81131	Canola	cytosol	49.3	7.87
AT5G09550.1	Thale cress	cytosol	49.3	7.87
Bra009390.1-P	Field mustard	cytosol	49.3	7.87
KRH42088	Soybean	cytosol	49.3	7.87
KRH49823	Soybean	cytosol, endoplasmic reticulum	49.3	7.87
HORVU4Hr1G059240.2	Barley	cytosol	47.89	6.53
HORVU5Hr1G009840.1	Barley	cytosol	46.48	6.04
Bra028630.1-P	Field mustard	cytosol	49.3	5.71
CDY44805	Canola	cytosol	49.3	5.56
KRH66563	Soybean	cytosol	38.03	4.85
HORVU3Hr1G038200.3	Barley	cytosol, nucleus, peroxisome	30.99	3.92
CDY65664	Canola	cytosol	22.54	3.9
HORVU1Hr1G064480.1	Barley	cytosol	12.68	2.02
CDX69899	Canola	cytosol	8.45	1.9
VIT_03s0017g00490.t01	Wine grape	cytosol	8.45	1.64
GSMUA_Achr7P02930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.2	UniProt:A0A287P880	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674
GO:GO:0005092	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:HORVU4Hr1G059230
EnsemblPlants:HORVU4Hr1G059230.1	InterPro:IPR036188	PFAM:PF00996	PANTHER:PTHR11787	PANTHER:PTHR11787:SF8	SUPFAM:SSF51905
UniParc:UPI000B462C5B	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:495444512..495444786

Molecular Weight (calculated)

7780.4 Da

IEP (calculated)

4.398

GRAVY (calculated)

0.124

Length

71 amino acids

Sequence
(BLAST)

1: MDEEYDVIVL GTGLKECILS GILSVDGLKV STEPPPVARF PSDFAYHHLE MLLDTSSSPI NCPRRAYALL S

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.