Factsheet for HORVU7Hr1G075170.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G115210.1
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	HORVU2Hr1G115210.1	AT1G14340.1	21798944
AT3G59920.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G104740.2	Barley	mitochondrion	77.27	90.43
Os05t0418000-01	Rice	cytosol, extracellular, plasma membrane, plastid	55.45	13.71
HORVU1Hr1G064490.8	Barley	cytosol	55.45	13.65
Os05t0304400-01	Rice	plasma membrane	53.64	13.26
CDX71860	Canola	cytosol	49.09	13.2
HORVU4Hr1G059230.1	Barley	cytosol	8.18	12.68
GSMUA_Achr7P23620_001	Banana	cytosol	50.91	12.67
CDX89038	Canola	cytosol	50.91	12.61
CDY45775	Canola	cytosol	50.91	12.61
CDY17885	Canola	cytosol	50.91	12.61
CDX79782	Canola	cytosol	50.91	12.61
Bra014523.1-P	Field mustard	cytosol	50.91	12.61
Bra004805.1-P	Field mustard	cytosol	50.91	12.61
CDX98399	Canola	cytosol	50.0	12.39
CDX67817	Canola	cytosol	50.0	12.39
Solyc12g017570.1.1	Tomato	plastid	50.0	12.39
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	50.0	12.39
AT2G44100.1	Thale cress	cytosol	50.0	12.36
HORVU1Hr1G064480.1	Barley	cytosol	50.0	12.33
PGSC0003DMT400035649	Potato	cytosol	49.09	12.16
KRH59137	Soybean	endoplasmic reticulum	49.09	12.16
Solyc08g015860.2.1	Tomato	extracellular	49.09	12.16
AT3G59920.1	Thale cress	cytosol	49.09	12.16
CDY05962	Canola	cytosol	49.09	12.16
Bra003395.1-P	Field mustard	cytosol	49.09	12.16
Bra007493.1-P	Field mustard	cytosol	48.18	11.91
VIT_05s0094g01550.t01	Wine grape	cytosol	47.27	11.71
GSMUA_Achr6P18380_001	Banana	cytosol	44.55	10.96
GSMUA_Achr10P...	Banana	cytosol	40.0	9.91
HORVU5Hr1G009840.1	Barley	cytosol	49.09	9.89
HORVU4Hr1G059240.2	Barley	cytosol	43.64	9.21
HORVU3Hr1G038200.3	Barley	cytosol, nucleus, peroxisome	20.0	3.92

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A287WXK5	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674
GO:GO:0005092	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:HORVU7Hr1G075170
EnsemblPlants:HORVU7Hr1G075170.1	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11
UniParc:UPI000B48182D	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:433998464..434008870

Molecular Weight (calculated)

12751.2 Da

IEP (calculated)

10.282

GRAVY (calculated)

-0.783

Length

110 amino acids

Sequence
(BLAST)

001: MLNPEWARPR RRSAAGTGLD PVSIRLRERC QISSPLTKVL HMDRNDYYGG DSTSLNLNQL WKKFRGEDKP PAHLGASRDY NVDMVPKHGA FSLWERQSFL
101: QRMVETSRFC

Best Arabidopsis Sequence Match ( AT2G44100.2 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKVM F

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.