Factsheet for HORVU1Hr1G064480.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G115210.1
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59920.1	HORVU2Hr1G115210.1	AT1G14340.1	21798944
AT3G59920.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G261000.1	Wheat	cytosol	91.7	91.7
TraesCS1B01G271800.2	Wheat	cytosol, golgi	91.48	91.48
HORVU1Hr1G064490.8	Barley	cytosol	86.55	86.35
KXG22017	Sorghum	cytosol	86.1	86.29
Zm00001d010255_P001	Maize	cytosol, extracellular	85.43	83.92
GSMUA_Achr7P23620_001	Banana	cytosol	81.39	82.13
Solyc12g017570.1.1	Tomato	plastid	79.82	80.18
GSMUA_Achr6P18380_001	Banana	cytosol	80.04	79.87
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	79.37	79.73
KRH59137	Soybean	endoplasmic reticulum	79.15	79.5
CDX67817	Canola	cytosol	78.92	79.28
CDX98399	Canola	cytosol	78.92	79.28
TraesCS1D01G261000.1	Wheat	golgi	92.6	79.12
Bra003395.1-P	Field mustard	cytosol	78.7	79.05
AT2G44100.1	Thale cress	cytosol	78.48	78.65
CDX79782	Canola	cytosol	78.25	78.6
PGSC0003DMT400035649	Potato	cytosol	78.25	78.6
Bra004805.1-P	Field mustard	cytosol	78.25	78.6
CDY17885	Canola	cytosol	78.25	78.6
CDY45775	Canola	cytosol	78.03	78.38
Solyc08g015860.2.1	Tomato	extracellular	78.03	78.38
Bra014523.1-P	Field mustard	cytosol	77.8	78.15
CDX89038	Canola	cytosol	77.8	78.15
VIT_05s0094g01550.t01	Wine grape	cytosol	77.58	77.93
AT3G59920.1	Thale cress	cytosol	77.35	77.7
Bra007493.1-P	Field mustard	cytosol	77.13	77.3
CDY05962	Canola	cytosol	76.91	77.25
CDX71860	Canola	cytosol	67.94	74.08
GSMUA_Achr10P...	Banana	cytosol	73.09	73.42
HORVU5Hr1G009840.1	Barley	cytosol	76.91	62.82
HORVU4Hr1G059240.2	Barley	cytosol	73.32	62.76
HORVU7Hr1G075170.1	Barley	mitochondrion	12.33	50.0
HORVU2Hr1G104740.2	Barley	mitochondrion	10.54	50.0
HORVU3Hr1G038200.3	Barley	cytosol, nucleus, peroxisome	20.4	16.22
HORVU4Hr1G059230.1	Barley	cytosol	2.02	12.68

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	EMBL:AK369742	UniProt:F2E0S1
InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:HORVU1Hr1G064480
EnsemblPlants:HORVU1Hr1G064480.1	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892	PANTHER:PTHR11787
PANTHER:PTHR11787:SF11	InterPro:RabGDI	SUPFAM:SSF51905	UniParc:UPI000200777C	:	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:F2E0S1]

Coordinates

chrchr1H:-:461568200..461574175

Molecular Weight (calculated)

49692.4 Da

IEP (calculated)

5.606

GRAVY (calculated)

-0.267

Length

446 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GDSTSLNLNQ LWKKFRGEDK PPAHLGSSKD YNVDMVPKFM MANGTLVRTL IHTDVTKYLS
101: FKAVDGSFVF SKGKIHKVPA TDMEAVKSPL MGLFEKRRAR NFFIYVQNYD EADPKTHQGL DLTTLTTKEL IAKHGLSDDT VDFIGHALAL HRDDRHLNEP
201: ALDTVKRMKL YSESLARFQG GSPYIYPLYG LGELPQGFAR LSAVYGGTYM LCKPECKVEF DMEGKACGVT SEGETAKCKK VVCDPSYLTN KVRKIGKVAR
301: AIAIMSHPIP NTNESHSVQI ILPQKQLGRN SDMYVFCCSY THNVAPKGKF IAFVSAEAES DNIQSELKPG IDLLGPVDEL FFDMYDRYEP VNEPSLDNCF
401: ISTSYDATTH FETTVTDVLN MYTMITGKAI DLTVDLSAAS AAEEEY

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.