CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99022	Soybean	cytosol	37.24	62.39
GSMUA_Achr7P02920_001	Banana	cytosol	22.45	43.14
KRH59137	Soybean	endoplasmic reticulum	70.92	31.31
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	70.41	31.08
HORVU4Hr1G059230.1	Barley	cytosol	10.71	29.58
EER92083	Sorghum	cytosol	65.31	28.64
Zm00001d029596_P001	Maize	cytosol, extracellular	64.8	28.41
TraesCS4B01G205900.1	Wheat	cytosol, golgi	64.8	28.41
Os03t0277000-01	Rice	plasma membrane	64.8	28.41
TraesCS4D01G206900.1	Wheat	cytosol	64.29	28.19
KRH42088	Soybean	cytosol	63.78	28.09
KRH49823	Soybean	cytosol, endoplasmic reticulum	62.76	27.64
Solyc01g105810.2.1	Tomato	cytosol, unclear	62.76	27.64
TraesCS4A01G098400.1	Wheat	cytosol	63.78	25.83
KRH66563	Soybean	cytosol	61.73	21.72
VIT_03s0017g00490.t01	Wine grape	cytosol	38.27	20.55
KRH05675	Soybean	extracellular, vacuole	13.27	13.07
KRH28917	Soybean	cytosol, peroxisome, plastid	25.0	8.89
KRH76543	Soybean	cytosol, peroxisome, plasma membrane	24.49	8.68
GSMUA_Achr7P02930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	EMBL:ACUP02000927	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	EnsemblPlantsGene:GLYMA_02G161000
GO:GO:0003674	GO:GO:0005092	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0030234	GO:GO:0050790
InterPro:IPR036188	UniProt:K7K8P2	EnsemblPlants:KRH71651	ProteinID:KRH71651	ProteinID:KRH71651.1	PFAM:PF00996
PRINTS:PR00891	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11	SUPFAM:SSF51905	UniParc:UPI00029558E8	:

Description

hypothetical protein

Coordinates

chr2:+:19217998..19218813

Molecular Weight (calculated)

22392.8 Da

IEP (calculated)

6.303

GRAVY (calculated)

-0.232

Length

196 amino acids

Sequence
(BLAST)

001: MDAEYDVNML STSLNECILR GLLSIDDLKV LHMDRNEYYG EESTSLNLNK LWTRFRGNDK LLPYLGASRD YSMDMNPRFS LVNGNLVHVL IHTNITHSLN
101: FNVVDGRYVF TEGKIHKRSS LLGTTLDTVK RMKLYAESLV HFQGGSPYTH PFYGLGELPQ AFAWLSVVFG ETYMLHKLKC NIEFDEEGKI VGVTSE

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.