Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G206900.1 | Wheat | cytosol | 91.12 | 98.66 |
| TraesCS4B01G205900.1 | Wheat | cytosol, golgi | 90.7 | 98.21 |
| Os03t0277000-01 | Rice | plasma membrane | 86.36 | 93.51 |
| Zm00001d029596_P001 | Maize | cytosol, extracellular | 86.16 | 93.29 |
| EER92083 | Sorghum | cytosol | 85.74 | 92.84 |
| GSMUA_Achr10P... | Banana | cytosol | 80.17 | 87.0 |
| GSMUA_Achr10P... | Banana | cytosol | 80.17 | 87.0 |
| GSMUA_Achr9P03980_001 | Banana | cytosol | 79.55 | 86.32 |
| HORVU4Hr1G059240.2 | Barley | cytosol | 90.08 | 83.69 |
| KRH42088 | Soybean | cytosol | 76.86 | 83.6 |
| KRH49823 | Soybean | cytosol, endoplasmic reticulum | 76.86 | 83.6 |
| VIT_03s0017g00490.t01 | Wine grape | cytosol | 62.4 | 82.74 |
| CDY21587 | Canola | cytosol | 75.62 | 82.25 |
| Bra009390.1-P | Field mustard | cytosol | 75.62 | 82.25 |
| CDY56553 | Canola | cytosol | 75.41 | 82.02 |
| CDX81131 | Canola | cytosol | 75.41 | 82.02 |
| Bra006026.1-P | Field mustard | cytosol | 74.38 | 82.0 |
| CDX69899 | Canola | cytosol | 53.31 | 81.9 |
| AT5G09550.1 | Thale cress | cytosol | 75.21 | 81.8 |
| TraesCS1A01G260900.1 | Wheat | cytosol | 73.97 | 80.45 |
| TraesCS1A01G261000.1 | Wheat | cytosol | 73.76 | 80.04 |
| TraesCS5A01G041100.1 | Wheat | cytosol | 72.31 | 78.65 |
| Solyc01g105810.2.1 | Tomato | cytosol, unclear | 71.9 | 78.2 |
| VIT_00s2317g00010.t01 | Wine grape | cytosol | 21.9 | 75.18 |
| CDY65664 | Canola | cytosol | 63.02 | 74.39 |
| KRH71651 | Soybean | cytosol, nucleus, peroxisome | 25.83 | 63.78 |
| Bra028630.1-P | Field mustard | cytosol | 74.59 | 58.89 |
| CDY44805 | Canola | cytosol | 74.38 | 57.23 |
| KRH66563 | Soybean | cytosol | 39.88 | 34.65 |
| TraesCS3A01G185700.1 | Wheat | cytosol | 21.69 | 18.75 |
| VIT_00s0313g00050.t01 | Wine grape | cytosol, nucleus | 60.74 | 15.79 |
Protein Annotations
| Gene3D:1.10.405.10 | MapMan:22.8.4.2 | Gene3D:3.30.519.10 | Gene3D:3.50.50.60 | InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor |
| GO:GO:0003674 | GO:GO:0005092 | GO:GO:0005093 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0030234 | InterPro:IPR036188 |
| PFAM:PF00996 | PRINTS:PR00891 | PRINTS:PR00892 | PANTHER:PTHR11787 | PANTHER:PTHR11787:SF10 | InterPro:RabGDI |
| SUPFAM:SSF51905 | EnsemblPlantsGene:TraesCS4A01G098400 | EnsemblPlants:TraesCS4A01G098400.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:109933163..109936939
Molecular Weight (calculated)
54497.1 Da
IEP (calculated)
6.205
GRAVY (calculated)
-0.279
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEYDVIVL GTGLKECILS GILSVDGLKV STEFPWKCCW IHHHQVFTKG DIILSYHFSL HLVYLQVLHM DRNDYYGGES TSLNLAKIWK RFKGSDTTPD
101: HLGVSKEYNV DMVPKFMMAN GALVRVLIRT SVTKYLNFKA VDGSFVYNNG KIHKVPATDV EALKSNLMGL FEKRRARKFF IYVQDYEEDD AKSHEGLNLH
201: KVTTRELISK YGLEDDTIDF IGHALALHRD DSYLDEPAID TVKRMKLYSE SLARFQGGSP YIYPLYGLGE LPQAFARLSA VYGGTYMLNK PECKVEFDES
301: GKAFGVTSEG ETAKCKKVVC DPSYLPDKVK KVGRVARAIC IMKHPIPDTK DSHSVQIILP KKQLKRKSDM YVFCCSYAHN VAPKGKFIAF VSTEAETDKP
401: EIELKPGIDL LGPVEETFFD MYDRYEPVNA AEEDNCFLTT SYDATTHFET TVKDVLALYS KITGKELDLS VDLNAASAGE NDAA
101: HLGVSKEYNV DMVPKFMMAN GALVRVLIRT SVTKYLNFKA VDGSFVYNNG KIHKVPATDV EALKSNLMGL FEKRRARKFF IYVQDYEEDD AKSHEGLNLH
201: KVTTRELISK YGLEDDTIDF IGHALALHRD DSYLDEPAID TVKRMKLYSE SLARFQGGSP YIYPLYGLGE LPQAFARLSA VYGGTYMLNK PECKVEFDES
301: GKAFGVTSEG ETAKCKKVVC DPSYLPDKVK KVGRVARAIC IMKHPIPDTK DSHSVQIILP KKQLKRKSDM YVFCCSYAHN VAPKGKFIAF VSTEAETDKP
401: EIELKPGIDL LGPVEETFFD MYDRYEPVNA AEEDNCFLTT SYDATTHFET TVKDVLALYS KITGKELDLS VDLNAASAGE NDAA
001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE
Arabidopsis Description
GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.