Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21587 | Canola | cytosol | 97.53 | 97.53 |
| Bra009390.1-P | Field mustard | cytosol | 97.3 | 97.3 |
| CDX69899 | Canola | cytosol | 68.76 | 97.14 |
| Bra006026.1-P | Field mustard | cytosol | 95.73 | 97.04 |
| CDY56553 | Canola | cytosol | 96.85 | 96.85 |
| CDX81131 | Canola | cytosol | 96.63 | 96.63 |
| CDY65664 | Canola | cytosol | 81.57 | 88.54 |
| KRH49823 | Soybean | cytosol, endoplasmic reticulum | 85.62 | 85.62 |
| KRH42088 | Soybean | cytosol | 85.17 | 85.17 |
| VIT_03s0017g00490.t01 | Wine grape | cytosol | 67.87 | 82.74 |
| Solyc01g105810.2.1 | Tomato | cytosol, unclear | 82.47 | 82.47 |
| EER92083 | Sorghum | cytosol | 82.47 | 82.1 |
| Os03t0277000-01 | Rice | plasma membrane | 82.02 | 81.66 |
| TraesCS4B01G205900.1 | Wheat | cytosol, golgi | 81.8 | 81.43 |
| Zm00001d029596_P001 | Maize | cytosol, extracellular | 81.57 | 81.21 |
| TraesCS4D01G206900.1 | Wheat | cytosol | 81.57 | 81.21 |
| AT3G59920.1 | Thale cress | cytosol | 77.3 | 77.48 |
| AT2G44100.1 | Thale cress | cytosol | 76.4 | 76.4 |
| TraesCS4A01G098400.1 | Wheat | cytosol | 81.8 | 75.21 |
| Bra028630.1-P | Field mustard | cytosol | 95.06 | 69.0 |
| GSMUA_Achr7P02930_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 17.53 | 67.83 |
| CDY44805 | Canola | cytosol | 94.83 | 67.09 |
| GSMUA_Achr7P02920_001 | Banana | cytosol | 13.93 | 60.78 |
| HORVU4Hr1G059230.1 | Barley | cytosol | 7.87 | 49.3 |
| AT3G06540.1 | Thale cress | cytosol | 24.49 | 19.36 |
Protein Annotations
| Gene3D:1.10.405.10 | MapMan:22.8.4.2 | Gene3D:3.30.519.10 | Gene3D:3.50.50.60 | EntrezGene:830814 | ProteinID:AED91409.1 |
| ArrayExpress:AT5G09550 | EnsemblPlantsGene:AT5G09550 | RefSeq:AT5G09550 | TAIR:AT5G09550 | RefSeq:AT5G09550-TAIR-G | EnsemblPlants:AT5G09550.1 |
| TAIR:AT5G09550.1 | ProteinID:CAB89375.1 | ncoils:Coil | InterPro:FAD/NAD-bd_sf | InterPro:GDP_dissociation_inhibitor | GO:GO:0003674 |
| GO:GO:0005092 | GO:GO:0005093 | GO:GO:0005096 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0048046 | GO:GO:0050790 |
| InterPro:IPR036188 | RefSeq:NP_196517.3 | PFAM:PF00996 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00891 | PRINTS:PR00892 | PANTHER:PTHR11787 | PANTHER:PTHR11787:SF10 | UniProt:Q9LXC0 |
| InterPro:RabGDI | SUPFAM:SSF51905 | SUPFAM:SSF54373 | UniParc:UPI000009FF06 | SEG:seg | : |
Description
Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
Coordinates
chr5:+:2963648..2966811
Molecular Weight (calculated)
49551.9 Da
IEP (calculated)
4.911
GRAVY (calculated)
-0.270
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.