CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81131	Canola	cytosol	68.36	96.63
CDY56553	Canola	cytosol	68.04	96.18
CDY21587	Canola	cytosol	67.73	95.73
CDX69899	Canola	cytosol	47.54	94.92
AT5G09550.1	Thale cress	cytosol	67.09	94.83
CDY65664	Canola	cytosol	57.39	88.05
KRH49823	Soybean	cytosol, endoplasmic reticulum	59.94	84.72
KRH42088	Soybean	cytosol	59.46	84.04
VIT_03s0017g00490.t01	Wine grape	cytosol	47.69	82.19
Solyc01g105810.2.1	Tomato	cytosol, unclear	57.87	81.8
TraesCS4B01G205900.1	Wheat	cytosol, golgi	57.39	80.76
TraesCS4D01G206900.1	Wheat	cytosol	57.07	80.31
Os03t0277000-01	Rice	plasma membrane	57.07	80.31
EER92083	Sorghum	cytosol	57.07	80.31
Zm00001d029596_P001	Maize	cytosol, extracellular	56.92	80.09
CDX98399	Canola	cytosol	53.9	76.35
CDX67817	Canola	cytosol	53.9	76.35
CDY17885	Canola	cytosol	53.42	75.68
CDX89038	Canola	cytosol	53.42	75.68
CDX79782	Canola	cytosol	53.26	75.45
CDY45775	Canola	cytosol	53.26	75.45
CDY05962	Canola	cytosol	52.78	74.77
TraesCS4A01G098400.1	Wheat	cytosol	57.23	74.38
CDX71860	Canola	cytosol	48.33	74.33
Bra028630.1-P	Field mustard	cytosol	72.02	73.9
GSMUA_Achr7P02930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	11.76	64.35
GSMUA_Achr7P02920_001	Banana	cytosol	9.7	59.8
HORVU4Hr1G059230.1	Barley	cytosol	5.56	49.3
CDY42416	Canola	endoplasmic reticulum, extracellular	9.22	48.74
CDY05966	Canola	cytosol	20.19	31.28
CDX71865	Canola	cytosol, mitochondrion	14.94	29.65
CDY23584	Canola	cytosol, nucleus, peroxisome	7.0	28.76
CDY24684	Canola	cytosol	17.96	19.96
CDY34947	Canola	cytosol, plastid, vacuole	16.69	19.16
CDY05274	Canola	plastid	16.69	18.72

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	GO:A0A078I1Q3	UniProt:A0A078I1Q3
EnsemblPlants:CDY44805	ProteinID:CDY44805	ProteinID:CDY44805.1	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674
GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00080814001	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891
PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI	SUPFAM:SSF51905	SUPFAM:SSF54373
UniParc:UPI0004EEC499	SEG:seg	:	:	:	:

Description

BnaC02g00820DGuanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A078I1Q3]

Coordinates

chrLK032601:+:203475..211430

Molecular Weight (calculated)

69969.0 Da

IEP (calculated)

5.781

GRAVY (calculated)

-0.517

Length

629 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PQENLGAIRE YNVDMIPKFI MANGTLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AMDFVMRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DSSGKAVGVT SAGETAKCKK VVCDPSYLSD KVKKVGKVNR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DSPEDELKPG IELLGPIDEI FYHSYDTYVP TNKQEEDNCF
401: ISGTYDATTH FESTVADVLE MYTKITGKTL DLSVDLSAAS RSSPRPRSTA SHSPSIHTER SSPRPSSYSS PPKTERSTPR TAGYTPSPQT ERSTPRTASY
501: TPSPQTASHD SHSSENTSND HGFFSRGRSS SSDDDYDFFW RRRRSSSDDE GMFSGFIDEI KDAIENYRAS KKDPVAAAAE VASTSGSIAC VTQAKAFQDC
601: LDEFETDISK CQSLMDMWCK CKKSSKPTI

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.