CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006026.1-P	Field mustard	cytosol	97.98	99.32
CDX81131	Canola	cytosol	98.43	98.43
CDX69899	Canola	cytosol	68.99	97.46
CDY21587	Canola	cytosol	97.08	97.08
AT5G09550.1	Thale cress	cytosol	96.85	96.85
CDY65664	Canola	cytosol	81.12	88.05
KRH49823	Soybean	cytosol, endoplasmic reticulum	85.84	85.84
KRH42088	Soybean	cytosol	85.84	85.84
VIT_03s0017g00490.t01	Wine grape	cytosol	67.87	82.74
Solyc01g105810.2.1	Tomato	cytosol, unclear	82.7	82.7
Zm00001d029596_P001	Maize	cytosol, extracellular	82.02	81.66
TraesCS4B01G205900.1	Wheat	cytosol, golgi	82.02	81.66
Os03t0277000-01	Rice	plasma membrane	82.02	81.66
EER92083	Sorghum	cytosol	82.02	81.66
TraesCS4D01G206900.1	Wheat	cytosol	81.8	81.43
CDX67817	Canola	cytosol	77.75	77.93
CDX98399	Canola	cytosol	77.75	77.93
CDY45775	Canola	cytosol	76.63	76.8
CDX79782	Canola	cytosol	76.63	76.8
CDX89038	Canola	cytosol	76.63	76.8
CDY17885	Canola	cytosol	76.63	76.8
CDY05962	Canola	cytosol	75.96	76.13
CDX71860	Canola	cytosol	69.44	75.55
TraesCS4A01G098400.1	Wheat	cytosol	82.02	75.41
CDY44805	Canola	cytosol	96.18	68.04
GSMUA_Achr7P02930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	17.3	66.96
GSMUA_Achr7P02920_001	Banana	cytosol	13.71	59.8
CDY42416	Canola	endoplasmic reticulum, extracellular	13.26	49.58
HORVU4Hr1G059230.1	Barley	cytosol	7.87	49.3
CDY05966	Canola	cytosol	27.64	30.3
CDX71865	Canola	cytosol, mitochondrion	21.12	29.65
CDY23584	Canola	cytosol, nucleus, peroxisome	9.89	28.76
CDY24684	Canola	cytosol	25.84	20.32
CDY34947	Canola	cytosol, plastid, vacuole	24.27	19.71
CDY05274	Canola	plastid	24.27	19.25

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	GO:A0A078IXD5	UniProt:A0A078IXD5
EnsemblPlants:CDY56553	ProteinID:CDY56553	ProteinID:CDY56553.1	InterPro:FAD/NAD-bd_sf	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674
GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0030234	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00019735001	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891
PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI	SUPFAM:SSF51905	SUPFAM:SSF54373
UniParc:UPI0004EE630F	SEG:seg	:	:	:	:

Description

BnaA03g55960DGuanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A078IXD5]

Coordinates

chrLK033498:-:53638..56358

Molecular Weight (calculated)

49541.9 Da

IEP (calculated)

4.966

GRAVY (calculated)

-0.286

Length

445 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PQENLGAVRE YNVDMIPKFI MANGTLVQTL IHTNVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVMRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DSSGKAIGVT SAGETAKCKK VVCDPSYLSD KVKKVGKVAR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNQQEEDNCF
401: ISGSYDATTH FESTVADVLE MYTKITGKTL DLSVDLSAAS ATAEN

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.