Factsheet for VIT_03s0017g00490.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69899	Canola	cytosol	69.86	80.95
VIT_00s2317g00010.t01	Wine grape	cytosol	31.23	80.85
KRH49823	Soybean	cytosol, endoplasmic reticulum	89.86	73.71
KRH42088	Soybean	cytosol	89.04	73.03
Solyc01g105810.2.1	Tomato	cytosol, unclear	84.66	69.44
Bra006026.1-P	Field mustard	cytosol	83.01	69.02
CDX81131	Canola	cytosol	83.56	68.54
CDY21587	Canola	cytosol	83.29	68.31
Bra009390.1-P	Field mustard	cytosol	83.29	68.31
CDY56553	Canola	cytosol	82.74	67.87
AT5G09550.1	Thale cress	cytosol	82.74	67.87
TraesCS4B01G205900.1	Wheat	cytosol, golgi	83.01	67.79
TraesCS4D01G206900.1	Wheat	cytosol	82.74	67.56
Os03t0277000-01	Rice	plasma membrane	82.19	67.11
EER92083	Sorghum	cytosol	81.92	66.89
Zm00001d029596_P001	Maize	cytosol, extracellular	81.92	66.89
VIT_05s0094g01550.t01	Wine grape	cytosol	81.1	66.67
GSMUA_Achr7P02930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	20.55	65.22
CDY65664	Canola	cytosol	72.05	64.15
TraesCS4A01G098400.1	Wheat	cytosol	82.74	62.4
Bra028630.1-P	Field mustard	cytosol	82.47	49.1
CDY44805	Canola	cytosol	82.19	47.69
KRH71651	Soybean	cytosol, nucleus, peroxisome	20.55	38.27
KRH66563	Soybean	cytosol	44.38	29.08
VIT_04s0044g00070.t01	Wine grape	peroxisome	22.74	14.93
VIT_00s0313g00050.t01	Wine grape	cytosol, nucleus	64.93	12.73
HORVU4Hr1G059230.1	Barley	cytosol	1.64	8.45
GSMUA_Achr7P02920_001	Banana	cytosol	1.1	3.92

Protein Annotations

Gene3D:1.10.405.10	MapMan:22.8.4.2	Gene3D:3.30.519.10	Gene3D:3.50.50.60	ProteinID:CCB57985	ProteinID:CCB57985.1
UniProt:F6HTH5	InterPro:FAD/NAD-bd_sf	EMBL:FN596248	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092
GO:GO:0005093	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0030234	GO:GO:0048046	GO:GO:0050790	InterPro:IPR036188	PFAM:PF00996	PRINTS:PR00891
PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI	SUPFAM:SSF51905	UniParc:UPI00021088B0
ArrayExpress:VIT_03s0017g00490	EnsemblPlantsGene:VIT_03s0017g00490	EnsemblPlants:VIT_03s0017g00490.t01	RefSeq:XP_002268877	RefSeq:XP_002268877.1	:

Description

Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:F6HTH5]

Coordinates

chr3:-:15021586..15047380

Molecular Weight (calculated)

40886.5 Da

IEP (calculated)

5.184

GRAVY (calculated)

-0.349

Length

365 amino acids

Sequence
(BLAST)

001: MANGGLVRVL IHTDVTKYLN FKAVDGSFVY NKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYE ENDPKSHEGM DLNKVTARDL ISKYGLEDDT
101: IDFIGHSLAL HSDDSYLDEP AMEFVKRMKL YAESLARFQG GSPYIYPMYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DENGKAFGVT SEGETAKCKK
201: VVCDPSYLPD KVQKVGKVAR AICIMSHSIP DTNDSHSVQV ILPQKQLGRK SDMYLFCCSY SHNVAPKGKY IAFVTTEAET DQPEVELKRG VDLLGPVDEI
301: FYETYDRFEP KNDHEVDHCF ISTSYDATTH FESTVKNVIA MYSKITGEEL DLTVDLSAAS AATGE

Best Arabidopsis Sequence Match ( AT5G09550.1 )
(BLAST)

001: MDEEYDVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESSSLNLTQ LWKRFRGSDT PEENLGASRE YNVDMIPKFI MANGLLVQTL IHTDVTKYLN
101: FKAVDGSFVY KKGKIYKVPA TDVEALKSPL MGLFEKRRAR KFFIYVQDYD EKDPKSHEGL DLSKVTAREI ISKYGLEDDT IDFIGHALAL HNDDDYLDQP
201: AIDFVKRIKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DGSGKAIGVT SAGETAKCKK VVCDPSYLSE KVKKVGKVTR
301: AVCIMSHPIP DTNDAHSVQI ILPQKQLGRK SDMYLFCCSY AHNVAPKGKY IAFVSAEAET DNPEEELKPG IELLGPTDEI FYHSYDTYVP TNIQEEDNCF
401: ISATYDATTH FESTVVDVLD MYTKITGKTL DLSVDLSAAS AAAEN

Arabidopsis Description

Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.