Factsheet for VIT_00s2317g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g00490.t01	Wine grape	cytosol	80.85	31.23
VIT_05s0094g01550.t01	Wine grape	cytosol	80.14	25.45
Os03t0277000-01	Rice	plasma membrane	75.89	23.94
TraesCS4B01G205900.1	Wheat	cytosol, golgi	74.47	23.49
EER92083	Sorghum	cytosol	73.76	23.27
TraesCS4D01G206900.1	Wheat	cytosol	73.76	23.27
Zm00001d029596_P001	Maize	cytosol, extracellular	73.05	23.04
TraesCS4A01G098400.1	Wheat	cytosol	75.18	21.9
VIT_04s0044g00070.t01	Wine grape	peroxisome	11.35	2.88
VIT_00s0313g00050.t01	Wine grape	cytosol, nucleus	31.21	2.36

Protein Annotations

EntrezGene:100855403	wikigene:100855403	MapMan:22.8.4.2	Gene3D:3.30.519.10	ProteinID:CBI29595	ProteinID:CBI29595.3
UniProt:D7TGH1	InterPro:FAD/NAD-bd_sf	EMBL:FN595963	InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092
GO:GO:0005093	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234
GO:GO:0050790	InterPro:IPR036188	EntrezGene:LOC100855403	wikigene:LOC100855403	PFAM:PF00996	PRINTS:PR00892
PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI0001BE36A2
ArrayExpress:VIT_00s2317g00010	EnsemblPlantsGene:VIT_00s2317g00010	EnsemblPlants:VIT_00s2317g00010.t01	RefSeq:XP_003635640	RefSeq:XP_003635640.1	RefSeq:XP_003635640.2

Description

Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:D7TGH1]

Coordinates

chrUn:+:41643850..41645794

Molecular Weight (calculated)

15752.2 Da

IEP (calculated)

4.118

GRAVY (calculated)

-0.434

Length

141 amino acids

Sequence
(BLAST)

001: MSHPIPNTSD SHSVQVILPQ KQLGRKSDMY LFCCSYSHNV APKGKYIAFV TTEAETDNPE IELKPGIELL GQVDEIFFDA YDRYEPANKQ DEDNCFISTS
101: YDATTHFEST VEDVIAMYSR ITGKNLDLTV DLSAASAADE E

Best Arabidopsis Sequence Match ( AT3G59920.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGVKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APEHLGASRD YNVDMMPKFM MGNGKLVRTL IHTDVTKYLS
101: FKAVDGSYVF VKGKVQKVPA TPMEALKSSL MGIFEKRRAG KFFSFVQEYD EKDPKTHDGM DLTRVTTKEL IAKYGLDGNT IDFIGHAVAL HTNDQHLDQP
201: AFDTVMRMKL YAESLARFQG TSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEGGKVIGVT SEGETAKCKK IVCDPSYLPN KVRKIGRVAR
301: AIAIMSHPIP NTNDSHSVQV IIPQKQLARK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELKPG TDLLGPVDEI FFDMYDRYEP VNEPELDNCF
401: ISTSYDATTH FETTVADVLN MYTLITGKQL DLSVDLSAAS AAEE

Arabidopsis Description

GDI2Guanosine nucleotide diphosphate dissociation inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178VFJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.