CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71651	Soybean	cytosol, nucleus, peroxisome	62.39	37.24
KRH43030	Soybean	cytosol, endoplasmic reticulum, nucleus	91.45	24.1
KRH59137	Soybean	endoplasmic reticulum	89.74	23.65
KRH49823	Soybean	cytosol, endoplasmic reticulum	77.78	20.45
KRH42088	Soybean	cytosol	76.92	20.22
KRH05675	Soybean	extracellular, vacuole	28.21	16.58
KRH66563	Soybean	cytosol	58.97	12.39
KRH28917	Soybean	cytosol, peroxisome, plastid	27.35	5.81
KRH76543	Soybean	cytosol, peroxisome, plasma membrane	27.35	5.79

Protein Annotations

Gene3D:3.30.519.10	Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A0R0FAD9	EMBL:ACUP02010954	InterPro:FAD/NAD-bd_sf
InterPro:GDP_dissociation_inhibitor	EnsemblPlantsGene:GLYMA_18G115100	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	InterPro:IPR036188
EnsemblPlants:KRG99022	ProteinID:KRG99022	ProteinID:KRG99022.1	PFAM:PF00996	PRINTS:PR00891	PRINTS:PR00892
PANTHER:PTHR11787	PANTHER:PTHR11787:SF10	InterPro:RabGDI	SUPFAM:SSF51905	UniParc:UPI0006EDE443	:

Description

hypothetical protein

Coordinates

chr18:-:13999969..14000767

Molecular Weight (calculated)

13145.0 Da

IEP (calculated)

4.806

GRAVY (calculated)

-0.093

Length

117 amino acids

Sequence
(BLAST)

001: MDEEYDVIVL GMGLKECILS SLLSVDGLKV LDMDMNDYYG GESTSLNLIQ LWKRFKGDDK PPPHLGASRD YNIDMNPKFI MANGNLVQVL IHTDVTKYLS
101: FKVMDGSFVF NKGKVCS

Best Arabidopsis Sequence Match ( AT2G44100.1 )
(BLAST)

001: MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS
101: FKAVDGSYVF VQGKVQKVPA TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT IDFIGHAVAL HCNDNHLHQP
201: AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR
301: AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF
401: ISTSYDATTH FDTTVVDVLN MYKLITGKEL DLSVDLNAAS AAEEE

Arabidopsis Description

GDI1Guanosine nucleotide diphosphate dissociation inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.