Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52676 | Canola | cytosol, nucleus, plastid | 69.64 | 22.81 |
| Bra038591.1-P | Field mustard | plastid | 94.64 | 12.5 |
| CDY26353 | Canola | plastid | 94.64 | 12.5 |
| AT1G61590.1 | Thale cress | plastid | 80.36 | 10.61 |
| CDY47586 | Canola | plastid | 76.79 | 10.31 |
| CDY20019 | Canola | cytosol | 28.57 | 7.58 |
| GSMUA_Achr2P17920_001 | Banana | cytosol | 42.86 | 6.28 |
| OQU92552 | Sorghum | plastid | 44.64 | 5.72 |
| TraesCS4D01G166800.1 | Wheat | cytosol | 44.64 | 5.59 |
| TraesCS4B01G162700.1 | Wheat | cytosol | 42.86 | 5.37 |
| HORVU6Hr1G032540.8 | Barley | mitochondrion, plastid | 41.07 | 5.35 |
| Zm00001d029258_P001 | Maize | mitochondrion, plastid | 41.07 | 5.32 |
| TraesCS6D01G027700.1 | Wheat | cytosol | 41.07 | 5.32 |
| TraesCS6B01G033300.1 | Wheat | cytosol | 41.07 | 5.31 |
| TraesCS6A01G024300.1 | Wheat | cytosol | 41.07 | 5.31 |
| Zm00001d047437_P001 | Maize | plastid | 41.07 | 5.23 |
| Os03t0364400-01 | Rice | plasma membrane | 41.07 | 5.15 |
| CDY68998 | Canola | cytosol | 21.43 | 5.13 |
| Solyc08g074980.2.1 | Tomato | plastid | 37.5 | 4.98 |
| VIT_02s0087g00270.t01 | Wine grape | plastid | 37.5 | 4.95 |
| PGSC0003DMT400040626 | Potato | plastid | 35.71 | 4.75 |
| KRH07729 | Soybean | cytosol | 32.14 | 4.1 |
| CDY72324 | Canola | cytosol, plasma membrane | 19.64 | 3.45 |
| CDY68189 | Canola | cytosol | 19.64 | 2.9 |
| CDX86877 | Canola | plastid | 21.43 | 2.76 |
| CDY66556 | Canola | plastid | 21.43 | 2.73 |
| CDY41127 | Canola | cytosol | 21.43 | 2.7 |
| CDX94273 | Canola | cytosol | 21.43 | 2.7 |
| CDX83496 | Canola | cytosol, plastid | 19.64 | 2.7 |
| CDX82145 | Canola | plastid | 17.86 | 2.54 |
| CDX85839 | Canola | cytosol | 17.86 | 2.53 |
| CDY33401 | Canola | cytosol | 19.64 | 2.41 |
| CDY65349 | Canola | cytosol | 19.64 | 2.41 |
| CDY49854 | Canola | nucleus | 17.86 | 2.36 |
| CDX68181 | Canola | cytosol | 16.07 | 2.28 |
| CDY65019 | Canola | mitochondrion, plastid | 16.07 | 2.27 |
| CDX68261 | Canola | mitochondrion, plastid | 16.07 | 2.27 |
| CDX74646 | Canola | endoplasmic reticulum, plasma membrane | 17.86 | 2.22 |
| CDX96417 | Canola | plastid | 16.07 | 2.0 |
| CDX72925 | Canola | plastid | 16.07 | 1.99 |
| CDY49088 | Canola | cytosol | 12.5 | 1.96 |
| CDY39319 | Canola | cytosol, plastid | 14.29 | 1.92 |
| CDY20721 | Canola | cytosol | 12.5 | 1.69 |
| CDY41811 | Canola | cytosol | 12.5 | 1.69 |
| CDY32778 | Canola | cytosol | 12.5 | 1.66 |
| CDY47750 | Canola | cytosol | 10.71 | 1.43 |
| CDX77041 | Canola | endoplasmic reticulum, plasma membrane | 5.36 | 1.26 |
| CDY03843 | Canola | plastid | 3.57 | 0.65 |
| CDY50604 | Canola | cytosol | 1.79 | 0.41 |
| CDY65104 | Canola | cytosol | 0.0 | 0.0 |
| CDY48175 | Canola | plastid | 0.0 | 0.0 |
| CDY52677 | Canola | cytosol | 0.0 | 0.0 |
| CDY56059 | Canola | cytosol | 0.0 | 0.0 |
| CDY65103 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY65105 | EnsemblPlantsGene:GSBRNA2T00044176001 | ProteinID:CDY65105 | ProteinID:CDY65105.1 | UniParc:UPI0004EE44E7 | UniProt:A0A078JF52 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaAnng20230DBnaAnng20230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF52]
Coordinates
chrLK034658:+:12001..12171
Molecular Weight (calculated)
5897.0 Da
IEP (calculated)
10.779
GRAVY (calculated)
-0.698
Length
56 amino acids
Sequence
(BLAST)
(BLAST)
1: MPAVVEVLES LMHHKDMAVS SGHWPPSPSS QGGKVSQKVR GDNGNSRKSA PGSLRS
001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS
Arabidopsis Description
PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.